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BaseInfo

ncRNA ID novel_gma_miR2362
Species Glycine max
Class miRNA
Genome position Chr15:51692432-51692523 [-]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 22
Mature sequence(if miRNA) 1 - UUUUGGAUUUUGUGCUCCUAUU - 22
Stem-loop(if miRNA) UAUU   -     UU  AAA    U    -AACA            U
    GGA CAUAA  UU   AAAA GCAA     UGGGCACUUGCA A
    ||| |||||  ||   |||| ||||     ||||||||||||
    CCU GUGUU  AG   UUUU UGUU     AUCUGUGAACGU G
UUAU   C     UU  --G    U    ACUAA            U
Stem-loop sequence UAUUGGACAUAAUUUUAAAAAAAUGCAAAACAUGGGCACUUGCAUAGUUGCAAGUGUCUAAAUCAUUGUUUUUUGGAUUUUGUGCUCCUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521625.3
ncRNA:22   UUAUCCUCGUGUUUUAGGUUUU   1
  ||*=|||||||*||||||||||
targets:463   AAGGGGAGCACCAAAUCCAAAA   484

2.5 PREDICTED: Glycine max exonuclease DPD1, chloroplastic/mitochondrial-like (LOC100799702), mRNA exonuclease DPD1, chloroplastic/mitochondrial-like(LOC100799702) coding protein psRNATarget