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BaseInfo

ncRNA ID	novel_gma_miR2360
Species	Glycine max
Class	miRNA
Genome position	Chr1:18318024-18318161 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451655
Length	24
Mature sequence(if miRNA)	1 - AUGCAUACACAUUAACAUCGGUUU - 24
Stem-loop(if miRNA)	--AUGCAUACA                 -                  --    UA              U            CAUUAACAUCGGUUUUU GAAAAAUCGAUGUUAACA  UCAU  GUUAACAUCGGUUU U            ||||||||||||||||| ||||||||||||||||||  ||||  |||||||||||||| C            GUAAUUGUAGCCAAAAA CUUUUUGGCUACAAUUGU  AGUA  CAAUUGUAGCCAAA A AUUGCACAUAC                 A                  AU    UG              A
Stem-loop sequence	AUGCAUACACAUUAACAUCGGUUUUUGAAAAAUCGAUGUUAACAUCAUUAGUUAACAUCGGUUUUUCAAAAACCGAUGUUAACGUAUGAUAUGUUAACAUCGGUUUUUCAAAAAACCGAUGUUAAUGCAUACACGUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006575451.2	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   **=|=||||*|=|||||||||||| targets:1231   CUGCUGAUGGUGAUGUGUAUGCAU   1254 Target Full Sequence	2.5	PREDICTED: Glycine max ultraviolet-B receptor UVR8-like (LOC100807837), transcript variant X3, mRNA	ultraviolet-B receptor UVR8-like(LOC100807837)	coding protein	psRNATarget
XM_006575450.2	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   **=|=||||*|=|||||||||||| targets:1230   CUGCUGAUGGUGAUGUGUAUGCAU   1253 Target Full Sequence	2.5	PREDICTED: Glycine max ultraviolet-B receptor UVR8-like (LOC100807837), transcript variant X2, mRNA	ultraviolet-B receptor UVR8-like(LOC100807837)	coding protein	psRNATarget
XM_003519310.3	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   **=|=||||*|=|||||||||||| targets:1230   CUGCUGAUGGUGAUGUGUAUGCAU   1253 Target Full Sequence	2.5	PREDICTED: Glycine max ultraviolet-B receptor UVR8-like (LOC100807837), transcript variant X1, mRNA	ultraviolet-B receptor UVR8-like(LOC100807837)	coding protein	psRNATarget
XM_003544141.3	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   **=|=||||*|=|||||||||||| targets:1238   CUGCUGAUGGUGAUGUGUAUGCAU   1261 Target Full Sequence	2.5	PREDICTED: Glycine max ultraviolet-B receptor UVR8-like (LOC100778718), transcript variant X2, mRNA	ultraviolet-B receptor UVR8-like(LOC100778718)	coding protein	psRNATarget
XM_006595832.2	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   **=|=||||*|=|||||||||||| targets:1242   CUGCUGAUGGUGAUGUGUAUGCAU   1265 Target Full Sequence	2.5	PREDICTED: Glycine max ultraviolet-B receptor UVR8-like (LOC100778718), transcript variant X1, mRNA	ultraviolet-B receptor UVR8-like(LOC100778718)	coding protein	psRNATarget
XM_006572825.2	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   =||=*|||||*|||||||*||||| targets:453   GAAUGGAUGUCAAUGUGUCUGCAU   476 Target Full Sequence	2.5	PREDICTED: Glycine max ankyrin-1-like (LOC100814428), transcript variant X1, mRNA	ankyrin-1-like(LOC100814428)	coding protein	psRNATarget
BT097554.1	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   =||=*|||||*|||||||*||||| targets:508   GAAUGGAUGUCAAUGUGUCUGCAU   531 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22O1 unknown mRNA	NA	coding protein	psRNATarget
NM_001253199.1	ncRNA:24   UUUGGCUACAAUUACACAUACGUA   1   =||=*|||||*|||||||*||||| targets:508   GAAUGGAUGUCAAUGUGUCUGCAU   531 Target Full Sequence	2.5	Glycine max ankyrin-1-like (LOC100814428), mRNA	ankyrin-1-like(LOC100814428)	coding protein	psRNATarget