ncRNA ID | novel_gma_miR2353 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:10620898-10620970 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCUGAUUCAACCUGCGUGGGAGG - 24 |
Stem-loop(if miRNA) |
--U            -   G   G   -----G          UCUGAUUCAACC UGC UGG AGG      GAGGGCU    |||||||||||| ||| ||| |||      ||||||G    GGGCUGGGUUGG AUG GCC UUC      UUUUCGC ACU            G   G   A   AAUUAG       |
Stem-loop sequence | UUCUGAUUCAACCUGCGUGGGAGGGGAGGGCUGCGCUUUUGAUUAACUUACCGGGUAGGGUUGGGUCGGGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006605676.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102662820 (LOC102662820), mRNA | uncharacterized LOC102662820(LOC102662820) | coding protein | psRNATarget | |||||||||
XM_003535550.2 |
|
3.0 | PREDICTED: Glycine max probable polygalacturonase (LOC100795453), mRNA | probable polygalacturonase(LOC100795453) | coding protein | psRNATarget |