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BaseInfo

ncRNA ID novel_gma_miR2353
Species Glycine max
Class miRNA
Genome position Chr10:10620898-10620970 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 24
Mature sequence(if miRNA) 1 - UUCUGAUUCAACCUGCGUGGGAGG - 24
Stem-loop(if miRNA) --U            -   G   G   -----G      
   UCUGAUUCAACC UGC UGG AGG      GAGGGCU
   |||||||||||| ||| ||| |||      ||||||G
   GGGCUGGGUUGG AUG GCC UUC      UUUUCGC
ACU            G   G   A   AAUUAG      
Stem-loop sequence UUCUGAUUCAACCUGCGUGGGAGGGGAGGGCUGCGCUUUUGAUUAACUUACCGGGUAGGGUUGGGUCGGGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006605676.2
ncRNA:24   GGAGGGUGCGU-CCAACUUAGUCUU   1
  |||||||||||-|||||||||||||
targets:335   CCUCCCACGCAAGGUUGAAUCAGAA   359

3.0 PREDICTED: Glycine max uncharacterized LOC102662820 (LOC102662820), mRNA uncharacterized LOC102662820(LOC102662820) coding protein psRNATarget
XM_003535550.2
ncRNA:24   GGAGGGU-GCGUCCAACUUAGUCUU   1
  =||=*||-|*|||||||||||||||
targets:351   UCUUGCAUCUCAGGUUGAAUCAGAA   375

3.0 PREDICTED: Glycine max probable polygalacturonase (LOC100795453), mRNA probable polygalacturonase(LOC100795453) coding protein psRNATarget