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BaseInfo

ncRNA ID	novel_gma_miR2340
Species	Glycine max
Class	miRNA
Genome position	Chr11:23031938-23032047 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451655
Length	24
Mature sequence(if miRNA)	87 - AUUUGAAUUUGAAUUUUUGGAGCC - 110
Stem-loop(if miRNA)	---A    A      AU       GCCAAAUUUG      -----   U         U     UUUG AUUUGA  UUUUGGA          GAGCCA     AAA UUCACUAAU A     |||| ||||||  |||||||          ||||||     ||| |||||||||     GAAC UGAACU  AGAACCU          CUUGGU     UUU AAGUGAUUA U CUUA    C      --       AAUCACCCGA      AUCGA   U         G
Stem-loop sequence	AUUUGAAUUUGAAUUUUUGGAGCCAAAUUUGGAGCCAAAAUUUCACUAAUUAUGAUUAGUGAAUUUUAGCUAUGGUUCAGCCCACUAAUCCAAGAUCAAGUCCAAGAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006576534.2	ncRNA:24   CCGAGGUUUUUAAGUUUAAGUUUA   1   **=|=|*=|||||||||||||||| targets:105   UUUUUCUGAAAUUCAAAUUCAAAU   128 Target Full Sequence	2.0	PREDICTED: Glycine max serine/threonine-protein kinase pakD-like (LOC102668134), mRNA	serine/threonine-protein kinase pakD-like(LOC102668134)	coding protein	psRNATarget
XM_003516267.3	ncRNA:24   CCGAGGUUUUUAAGUUUAAGUUUA   1   **||=|**|||||||||||||||| targets:89   UUCUUCCCAAAUUCAAAUUCAAAU   112 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100782156 (LOC100782156), mRNA	uncharacterized LOC100782156(LOC100782156)	coding protein	psRNATarget
AK286453.1	ncRNA:24   CCGAGGUUUUUAAGUUUAAGUUUA   1   |||||||*||||||||*||||||| targets:1203   GGCUCCACAAAUUCAAUUUCAAAU   1226 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-28-L19	NA	coding protein	psRNATarget
XM_003527062.3	ncRNA:24   CCGAGGUUUUUAAGUUUAAGUUUA   1   *||*=||||||||||||*|||||* targets:64   UGCAUCAAAAAUUCAAAAUCAAAA   87 Target Full Sequence	2.5	PREDICTED: Glycine max PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (LOC100812033), transcript variant X1, mRNA	PLASMODESMATA CALLOSE-BINDING PROTEIN 3(LOC100812033)	coding protein	psRNATarget
XM_006581951.2	ncRNA:24   CCGAGGUUUUUAAGUUUAAGUUUA   1   *||*=||||||||||||*|||||* targets:68   UGCAUCAAAAAUUCAAAAUCAAAA   91 Target Full Sequence	2.5	PREDICTED: Glycine max PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (LOC100812033), transcript variant X2, mRNA	PLASMODESMATA CALLOSE-BINDING PROTEIN 3(LOC100812033)	coding protein	psRNATarget