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BaseInfo

ncRNA ID	novel_gma_miR2336
Species	Glycine max
Class	miRNA
Genome position	Chr1:38494057-38494187 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451655
Length	24
Mature sequence(if miRNA)	1 - AAAAACCGAUGUGAACUGUCAACA - 24
Stem-loop(if miRNA)	--   UA    A     A               CA        G    AG        A         UUG  AGUU ACAUC GUUUUUAUAUAGAAC  AUGUUAAC UAUA  UUAACAUC AUUUUUU   |||  |||| ||||| |||||||||||||||  |||||||| ||||  |||||||| ||||||U   AAC  UCAA UGUAG CAAAAAUAUGUUUUG  UACAAUUG AUAU  AAUUGUAG UAAAAGA AC   UG    G     C               AC        A    CU        C
Stem-loop sequence	UUGUAAGUUAACAUCAGUUUUUAUAUAGAACCAAUGUUAACGUAUAAGUUAACAUCAAUUUUUUUAGAAAAUCGAUGUUAAUCUAUAAGUUAACAUCAGUUUUGUAUAAAAACCGAUGUGAACUGUCAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003554185.3	ncRNA:24   ACAACUGUCAAGUGUAGCCAAAAA   1   *|||*|=|*||||||||||||||| targets:1652   GGUUUAUAAUUCACAUCGGUUUUU   1675 Target Full Sequence	2.0	PREDICTED: Glycine max sugar transporter ERD6-like 7 (LOC100819822), mRNA	sugar transporter ERD6-like 7(LOC100819822)	coding protein	psRNATarget
LQ242673.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:8   UGUAAGUGACAUUUAACAUCGGUUUUU   34 Target Full Sequence	2.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:49   UGUAAGUGACAUUUAACAUCGGUUUUU   75 Target Full Sequence	2.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:150   UGUAAGUGACAUUUAACAUCGGUUUUU   176 Target Full Sequence	2.5	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:8   UGUAAGUGACAUUUAACAUCGGUUUUU   34 Target Full Sequence	2.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:49   UGUAAGUGACAUUUAACAUCGGUUUUU   75 Target Full Sequence	2.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:150   UGUAAGUGACAUUUAACAUCGGUUUUU   176 Target Full Sequence	2.5	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:8   UGUAAGUGACAUUUAACAUCGGUUUUU   34 Target Full Sequence	2.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:49   UGUAAGUGACAUUUAACAUCGGUUUUU   75 Target Full Sequence	2.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   ACA---ACUGUCAAGUGUAGCCAAAAA   1   |||---|||||*||*|||||||||||| targets:150   UGUAAGUGACAUUUAACAUCGGUUUUU   176 Target Full Sequence	2.5	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget