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BaseInfo

ncRNA ID novel_gma_miR2332
Species Glycine max
Class miRNA
Genome position Chr11:25818886-25819017 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655;SRR1295525
Length 24
Mature sequence(if miRNA) 1 - AAAUCGAUGUUGUAAGUGCUUAGA - 24
Stem-loop(if miRNA) -----AAA                    ACU           A                AAUC  ACUA
        UCGAUGUUGUAAGUGCUUAG   ACAUCGGUUUU AAAUAACCGAUGUUAA    GC    A
        ||||||||||||||||||||   ||||||||||| ||||||||||||||||    ||
        GGCUACAACAUUCACGAAUU   UGUAGCCAAAA UUUAUUGGCUACAAUU    CG    A
AUUUUAUC                    -GU           G                --GU  AACU
Stem-loop sequence AAAUCGAUGUUGUAAGUGCUUAGACUACAUCGGUUUUAAAAUAACCGAUGUUAAAAUCGCACUAAAUCAAGCUGUUAACAUCGGUUAUUUGAAAACCGAUGUUGUUAAGCACUUACAACAUCGGCUAUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   AGAUUCGUGAAUGUUGUAGCUAAA   1
  ||||||||=||||||=||||||||
targets:1711   UCUAAGCAUUUACAAUAUCGAUUU   1734

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget