ncRNA ID | novel_gma_miR2332 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:25818886-25819017 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655;SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUCGAUGUUGUAAGUGCUUAGA - 24 |
Stem-loop(if miRNA) |
-----AAA                    ACU           A                AAUC  ACUA         UCGAUGUUGUAAGUGCUUAG   ACAUCGGUUUU AAAUAACCGAUGUUAA    GC    A         ||||||||||||||||||||   ||||||||||| ||||||||||||||||    ||         GGCUACAACAUUCACGAAUU   UGUAGCCAAAA UUUAUUGGCUACAAUU    CG    A AUUUUAUC                    -GU           G                --GU  AACU |
Stem-loop sequence | AAAUCGAUGUUGUAAGUGCUUAGACUACAUCGGUUUUAAAAUAACCGAUGUUAAAAUCGCACUAAAUCAAGCUGUUAACAUCGGUUAUUUGAAAACCGAUGUUGUUAAGCACUUACAACAUCGGCUAUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
2.5 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget |