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BaseInfo

ncRNA ID	novel_gma_miR2330
Species	Glycine max
Class	miRNA
Genome position	Chr9:40610898-40611005 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451655;SRR1451604
Length	24
Mature sequence(if miRNA)	85 - AGUCUGUGGAAACGGUCGAGCGCC - 108
Stem-loop(if miRNA)	--U    U      GG        -CA  UAU        UUAA      CAACUCA    GCUU GAUUGU  UCGCAGGC   UC   AAAGAUGU    CUGCAC       C    |||| ||||||  ||||||||   ||   ||||||||    ||||||       U    CGAG CUGGCA  GGUGUCUG   AG   UUUCUGCG    GAUGUG       G CCG    -      AA        AUG  -UC        ----      UACCCAU
Stem-loop sequence	UGCUUUGAUUGUGGUCGCAGGCCAUCUAUAAAGAUGUUUAACUGCACCAACUCACUGUACCCAUGUGUAGGCGUCUUUCUGAGUAGUCUGUGGAAACGGUCGAGCGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598521.1	ncRNA:24   CCGCGAGCUGGCAAAGGUGUCUGA   1   ||=||||||||||||||||||||| targets:443   GGUGCUCGACCGUUUCCACAGACU   466 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102669434 (LOC102669434), mRNA	uncharacterized LOC102669434(LOC102669434)	coding protein	psRNATarget
XM_014771300.1	ncRNA:24   CCGCGAGCUGGCAAAGGUGUCUGA   1   |||||||||*||||||||||*||| targets:598   GGCGCUCGAGCGUUUCCACAUACU   621 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X3, mRNA	uncharacterized LOC102669491(LOC102669491)	coding protein	psRNATarget
XM_014771298.1	ncRNA:24   CCGCGAGCUGGCAAAGGUGUCUGA   1   |||||||||*||||||||||*||| targets:1151   GGCGCUCGAGCGUUUCCACAUACU   1174 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X1, mRNA	uncharacterized LOC102669491(LOC102669491)	coding protein	psRNATarget
XM_014771299.1	ncRNA:24   CCGCGAGCUGGCAAAGGUGUCUGA   1   |||||||||*||||||||||*||| targets:1568   GGCGCUCGAGCGUUUCCACAUACU   1591 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X2, mRNA	uncharacterized LOC102669491(LOC102669491)	coding protein	psRNATarget