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BaseInfo

ncRNA ID novel_gma_miR2320
Species Glycine max
Class miRNA
Genome position Chr6:46589758-46589802 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655;SRR1451660
Length 22
Mature sequence(if miRNA) 24 - UGAAGUAGUUGGAGAACUUCCU - 45
Stem-loop(if miRNA) --           U  U    U
  GGAGUUCUUCA CU CUUC U
  ||||||||||| || |||| G
  CUUCAAGAGGU GA GAAG U
UC           U  U    U
Stem-loop sequence GGAGUUCUUCAUCUUCUUCUUGUUGAAGUAGUUGGAGAACUUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094982.1
ncRNA:22   UCCUUCAAGAGGUUGAUGAAGU   1
  ***||*||||=|||||||||||
targets:595   UCCAAUUUCUUCAACUACUUCA   616

2.5 Soybean clone JCVI-FLGm-6D17 unknown mRNA NA coding protein psRNATarget
AK286317.1
ncRNA:22   UCCUUCAAGAGGUUGAUGAAGU   1
  =*|||*|||*||||||||||||
targets:604   GCGAACUUCACCAACUACUUCA   625

2.5 Glycine max cDNA, clone: GMFL01-26-B10 NA coding protein psRNATarget
XM_003518636.3
ncRNA:22   UCCUUCAAGAGGUUGAUGAAGU   1
  =*|||*|||*||||||||||||
targets:1006   GCGAACUUCACCAACUACUUCA   1027

2.5 PREDICTED: Glycine max probable galacturonosyltransferase-like 3 (LOC100802180), mRNA probable galacturonosyltransferase-like 3(LOC100802180) coding protein psRNATarget