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BaseInfo

ncRNA ID novel_gma_miR2316
Species Glycine max
Class miRNA
Genome position Chr9:22476923-22477016 [+]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 24
Mature sequence(if miRNA) 71 - UUCGGAGACAGGACUGGUGUAGUC - 94
Stem-loop(if miRNA) ----CUGAGUA      G          -     UGUCUGUUA   GAA  A
           UCCUGU UUUGAACAUC CUCCU         AGU   GC U
           |||||| |||||||||| |||||         |||   ||
           AGGACA AGGCUUGUGG GAGGA         UCG   UG A
CUGAUGUGGUC      G          A     -------UG   AUG  G
Stem-loop sequence CUGAGUAUCCUGUGUUUGAACAUCCUCCUUGUCUGUUAAGUGAAGCAUAGGUGUAGCUGUAGGAGAGGUGUUCGGAGACAGGACUGGUGUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536511.3
ncRNA:24   CUGAUGUGGUCAGGACAGAGGCUU   1
  *|=|=*||||||||*|||||||||
targets:366   AAUUGGACCAGUCCAGUCUCCGAA   389

2.5 PREDICTED: Glycine max pyruvate, phosphate dikinase regulatory protein 1, chloroplastic-like (LOC100794046), mRNA pyruvate, phosphate dikinase regulatory protein 1, chloroplastic-like(LOC100794046) coding protein psRNATarget