ncRNA ID | novel_gma_miR2316 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:22476923-22477016 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654 |
Length | 24 |
Mature sequence(if miRNA) | 71 - UUCGGAGACAGGACUGGUGUAGUC - 94 |
Stem-loop(if miRNA) |
----CUGAGUA      G          -     UGUCUGUUA   GAA  A            UCCUGU UUUGAACAUC CUCCU         AGU   GC U            |||||| |||||||||| |||||         |||   ||            AGGACA AGGCUUGUGG GAGGA         UCG   UG A CUGAUGUGGUC      G          A     -------UG   AUG  G |
Stem-loop sequence | CUGAGUAUCCUGUGUUUGAACAUCCUCCUUGUCUGUUAAGUGAAGCAUAGGUGUAGCUGUAGGAGAGGUGUUCGGAGACAGGACUGGUGUAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003536511.3 |
|
2.5 | PREDICTED: Glycine max pyruvate, phosphate dikinase regulatory protein 1, chloroplastic-like (LOC100794046), mRNA | pyruvate, phosphate dikinase regulatory protein 1, chloroplastic-like(LOC100794046) | coding protein | psRNATarget |