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BaseInfo

ncRNA ID novel_gma_miR2314
Species Glycine max
Class miRNA
Genome position Chr4:18233810-18233935 [-]
Reference genome Glycine_max_v2.0
Source SRR1294483;SRR2045374
Length 21
Mature sequence(if miRNA) 1 - UUUUAAAAGUCUGGCCUGGCC - 21
Stem-loop(if miRNA) --    A         G     CC G  -  U    UAC      --       --   CUGAGCC
  UCAG CCAGACUUU AAAGG  U AG CC AGCC   GAUGAA  UCUUUGA  GGC       U
  |||| ||||||||| |||||  | || || ||||   ||||||  |||||||  |||
  GGUC GGUCUGAAA UUUUU  A UC GG UCGG   UUAUUU  AGAAACU  CCG       G
CC    C         A     AU G  U  C    -CU      UC       AU   AUAUCCG
Stem-loop sequence UCAGACCAGACUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUCGGCUCGGUCUGAUAUUUUUAAAAGUCUGGCCUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550759.3
ncRNA:21   CCGGUCCGGUCUGAAAAUUUU   1
  ***|=*|||||||||||||||
targets:769   CUACGCGCCAGACUUUUAAAA   789

3.0 PREDICTED: Glycine max NEDD8 ultimate buster 1-like (LOC100778435), mRNA NEDD8 ultimate buster 1-like(LOC100778435) coding protein psRNATarget