ncRNA ID | novel_gma_miR2314 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:18233810-18233935 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294483;SRR2045374 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUAAAAGUCUGGCCUGGCC - 21 |
Stem-loop(if miRNA) |
--    A         G     CC G  -  U    UAC      --       --   CUGAGCC   UCAG CCAGACUUU AAAGG  U AG CC AGCC   GAUGAA  UCUUUGA  GGC       U   |||| ||||||||| |||||  | || || ||||   ||||||  |||||||  |||   GGUC GGUCUGAAA UUUUU  A UC GG UCGG   UUAUUU  AGAAACU  CCG       G CC    C         A     AU G  U  C    -CU      UC       AU   AUAUCCG |
Stem-loop sequence | UCAGACCAGACUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUCGGCUCGGUCUGAUAUUUUUAAAAGUCUGGCCUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550759.3 |
|
3.0 | PREDICTED: Glycine max NEDD8 ultimate buster 1-like (LOC100778435), mRNA | NEDD8 ultimate buster 1-like(LOC100778435) | coding protein | psRNATarget |