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BaseInfo

ncRNA ID novel_gma_miR2311
Species Glycine max
Class miRNA
Genome position Chr4:48357437-48357563 [+]
Reference genome Glycine_max_v2.0
Source SRR1294483
Length 24
Mature sequence(if miRNA) 104 - GUGAACCGUCUUAGAAUAUGCUGC - 127
Stem-loop(if miRNA) --AA                CA    U     CU   C                    AG   G
    UAUAUUCUAAGACGGU  ACUC AGAAA  CAU UUAGAAUGUAAUACUUUUUA  GUG U
    ||||||||||||||||  |||| |||||  ||| ||||||||||||||||||||  |||
    GUAUAAGAUUCUGCCA  UGAG UCUUU  GUA AAUCUUACAUUAUGAAAGAU  UAU U
CGUC                AG    U     AG   A                    -G   C
Stem-loop sequence AAUAUAUUCUAAGACGGUCAACUCUAGAAACUCAUCUUAGAAUGUAAUACUUUUUAAGGUGGUUCUAUGUAGAAAGUAUUACAUUCUAAAAUGGAUUUCUUGAGUGAACCGUCUUAGAAUAUGCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CGUCGUAUAAGAUUCUGCCAAGUG   1
  **|*=|*|||||||||||||||*|
targets:2604   AAAAUACAUUCUAAGACGGUUCUC   2627

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget