ncRNA ID | novel_gma_miR2311 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:48357437-48357563 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294483 |
Length | 24 |
Mature sequence(if miRNA) | 104 - GUGAACCGUCUUAGAAUAUGCUGC - 127 |
Stem-loop(if miRNA) |
--AA                CA    U     CU   C                    AG   G     UAUAUUCUAAGACGGU  ACUC AGAAA  CAU UUAGAAUGUAAUACUUUUUA  GUG U     ||||||||||||||||  |||| |||||  ||| ||||||||||||||||||||  |||     GUAUAAGAUUCUGCCA  UGAG UCUUU  GUA AAUCUUACAUUAUGAAAGAU  UAU U CGUC                AG    U     AG   A                    -G   C |
Stem-loop sequence | AAUAUAUUCUAAGACGGUCAACUCUAGAAACUCAUCUUAGAAUGUAAUACUUUUUAAGGUGGUUCUAUGUAGAAAGUAUUACAUUCUAAAAUGGAUUUCUUGAGUGAACCGUCUUAGAAUAUGCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |