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BaseInfo

ncRNA ID novel_gma_miR2306
Species Glycine max
Class miRNA
Genome position Chr3:33406162-33406298 [-]
Reference genome Glycine_max_v2.0
Source SRR1294483
Length 24
Mature sequence(if miRNA) 1 - AGAGGAGGAAGAAACACAGAUUGG - 24
Stem-loop(if miRNA) --    C   CC G           C   C                  C    GC     A   C   
  AAUC GUG  U UUCCUCCUCUA CAG UCAAUAUCUUUCCUUUCA CUUU  UUUUG AAA UACA
  |||| |||  | ||||||||||| ||| |||||||||||||||||| ||||  ||||| ||| |||C
  UUAG CAC  A AAGGAGGAGAU GUC AGUUAUAGAAAGGAAAGU GAAA  AAAAC UUU AUGU
GG    A   AA G           A   C                  U    AC     A   A   
Stem-loop sequence AAUCCGUGCCUGUUCCUCCUCUACCAGCUCAAUAUCUUUCCUUUCACCUUUGCUUUUGAAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGACCUGAUAGAGGAGGAAGAAACACAGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003528691.3
ncRNA:24   GGUUAGACACAAAGAAGGAGGAGA   1
  ||*||=|*|*||||||||||||||
targets:26   CCCAUUUCUUUUUCUUCCUCCUCU   49

3.0 PREDICTED: Glycine max pectinesterase-like (LOC100777646), mRNA pectinesterase-like(LOC100777646) coding protein psRNATarget
XM_003549094.3
ncRNA:24   GGUUAGACACAAAGAAGGAGGAGA   1
  *=||||**|||||||||||||||*
targets:14   GUAAUCCUUGUUUCUUCCUCCUCC   37

3.0 PREDICTED: Glycine max probable aminotransferase ACS12 (LOC100800539), mRNA probable aminotransferase ACS12(LOC100800539) coding protein psRNATarget