ncRNA ID | novel_gma_miR2306 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:33406162-33406298 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294483 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGGAGGAAGAAACACAGAUUGG - 24 |
Stem-loop(if miRNA) |
--    C   CC G           C   C                  C    GC     A   C      AAUC GUG  U UUCCUCCUCUA CAG UCAAUAUCUUUCCUUUCA CUUU  UUUUG AAA UACA   |||| |||  | ||||||||||| ||| |||||||||||||||||| ||||  ||||| ||| |||C   UUAG CAC  A AAGGAGGAGAU GUC AGUUAUAGAAAGGAAAGU GAAA  AAAAC UUU AUGU GG    A   AA G           A   C                  U    AC     A   A    |
Stem-loop sequence | AAUCCGUGCCUGUUCCUCCUCUACCAGCUCAAUAUCUUUCCUUUCACCUUUGCUUUUGAAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGACCUGAUAGAGGAGGAAGAAACACAGAUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003528691.3 |
|
3.0 | PREDICTED: Glycine max pectinesterase-like (LOC100777646), mRNA | pectinesterase-like(LOC100777646) | coding protein | psRNATarget | |||||||||
XM_003549094.3 |
|
3.0 | PREDICTED: Glycine max probable aminotransferase ACS12 (LOC100800539), mRNA | probable aminotransferase ACS12(LOC100800539) | coding protein | psRNATarget |