| ncRNA ID | novel_gma_miR2301 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr11:17245458-17245598 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1451654;SRR1451658;SRR1451660;SRR1451663;SRR1451605;SRR1451609;SRR1451610;SRR1451611;SRR1451615;SRR1451624 |
| Length | 22 |
| Mature sequence(if miRNA) | 120 - UUGAGGACCAAAUUGAACCUUU - 141 |
| Stem-loop(if miRNA) |
-- G A A CC A UA ---- UA AGGUU AAUUU GUCUUUAAGUUUUUAAAAAU AAUCAAUUUGGUU CAAAUU UUU AAU GG C ||||| ||||| |||||||||||||||||||| ||||||||||||| |||||| ||| ||| || UCCAA UUAAA CAGGAGUUUAAGAAUUUUUA UUAGUUAAAUUAG GUUUAA AAA UUG CC A UU G C C -U A UC AACU UA |
| Stem-loop sequence | AGGUUGAAUUUAGUCUUUAAGUUUUUAAAAAUAAAUCAAUUUGGUUCCCAAAUUAUUUUAAAUGGUACAAUCCUCAAGUUCUAAAAAAUUUGUGAUUAAAUUGAUUCAUUUUUAAGAAUUUGAGGACCAAAUUGAACCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003547028.3 |
|
1.0 | PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X2, mRNA | probable protein phosphatase 2C 62(LOC100815469) | coding protein | psRNATarget | |||||||||
| XM_014768080.1 |
|
1.0 | PREDICTED: Glycine max probable protein phosphatase 2C 62 (LOC100815469), transcript variant X1, mRNA | probable protein phosphatase 2C 62(LOC100815469) | coding protein | psRNATarget |