ncRNA ID | novel_gma_miR2298 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:10037946-10038042 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAAUUGAGGAUUCUAAGACGGU - 24 |
Stem-loop(if miRNA) |
--A    UU   G                        C          G    UAAA  GAG AUUCUAAGACGGUUUCUCAAAGAU GUCUUAGAAU U    ||||  ||| |||||||||||||||||||||||| ||||||||||    AUUU  UUU UAAGAUUCUGUCAAAGAGUUUCUG CAGAAUCUUA A ACA    -U   G                        A          C |
Stem-loop sequence | AUAAAUUGAGGAUUCUAAGACGGUUUCUCAAAGAUCGUCUUAGAAUGUACAUUCUAAGACAGUCUUUGAGAAACUGUCUUAGAAUGUUUUUUUAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763138.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget | |||||||||
XM_006589010.2 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget | |||||||||
XM_014777564.1 |
|
2.5 | PREDICTED: Glycine max 2-hydroxyisoflavanone synthase-like (LOC106799383), mRNA | 2-hydroxyisoflavanone synthase-like(LOC106799383) | coding protein | psRNATarget |