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BaseInfo

ncRNA ID novel_gma_miR2295
Species Glycine max
Class miRNA
Genome position Chr5:13699494-13699575 [-]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 22
Mature sequence(if miRNA) 61 - UCAAAAAACCGUCUUAGAAAGU - 82
Stem-loop(if miRNA) --     A   C      G     AG C            U
  UCAAA AAC GUCUUA AAAGU  A UUUCUAAGACGG U
  ||||| ||| |||||| |||||  | ||||||||||||
  AGUUU UUG CAGAAU UUUCA  U AAAGAUUCUGCC A
AA     C   U      G     AA A            A
Stem-loop sequence UCAAAAAACCGUCUUAGAAAGUAGACUUUCUAAGACGGUUAACCGUCUUAGAAAAUAAACUUUGUAAGACUGUUCUUUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:22   UGAAAGAUUCUGCCAAAAAACU   1
  ||*|||||||||||||*|||||
targets:2513   ACAUUCUAAGACGGUUCUUUGA   2534

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014762177.1
ncRNA:22   UGAAAGAUUCUGCCAAAAAACU   1
  *=|||||*=|||||||||||||
targets:54   UUUUUCUCGGACGGUUUUUUGA   75

2.0 PREDICTED: Glycine max ABC transporter B family member 28 (LOC100791034), transcript variant X2, mRNA ABC transporter B family member 28(LOC100791034) coding protein psRNATarget
XM_014773514.1
ncRNA:22   UGAAAGAUUCUGCCAAAAAACU   1
  ||*|||||||||||||*||||=
targets:268   ACAUUCUAAGACGGUUAUUUGG   289

2.5 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget