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BaseInfo

ncRNA ID novel_gma_miR2292
Species Glycine max
Class miRNA
Genome position Chr5:24521036-24521149 [-]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 23
Mature sequence(if miRNA) 1 - UAAGUUAACAUCGGUUUUUGACU - 23
Stem-loop(if miRNA) --UA                               A   -        AAACCA   U
    AAAAAUCGAUGUUAACUUAUACGUUAACAUC GUU UAUGUUAA      AUG U
    ||||||||||||||||||||||||||||||| ||| ||||||||      |||
    UUUUUGGCUACAAUUGAAUAUGCAAUUGUAG CAA GUACAAUU      UAC A
UCAG                               C   U        -AAAAA   A
Stem-loop sequence UAAAAAAUCGAUGUUAACUUAUACGUUAACAUCAGUUUAUGUUAAAAACCAAUGUUAACAUAAAAAUUAACAUGUAACCGAUGUUAACGUAUAAGUUAACAUCGGUUUUUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555202.3
ncRNA:23   UCAGUUUUUGGCUACAAUUGAAU   1
  *|**|||||||||||||*||||=
targets:779   UGGAAAAAACCGAUGUUUACUUG   801

2.5 PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100790240), mRNA probable serine/threonine-protein kinase At1g18390(LOC100790240) coding protein psRNATarget