ncRNA ID | novel_gma_miR2292 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:24521036-24521149 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UAAGUUAACAUCGGUUUUUGACU - 23 |
Stem-loop(if miRNA) |
--UA                               A   -        AAACCA   U     AAAAAUCGAUGUUAACUUAUACGUUAACAUC GUU UAUGUUAA      AUG U     ||||||||||||||||||||||||||||||| ||| ||||||||      |||     UUUUUGGCUACAAUUGAAUAUGCAAUUGUAG CAA GUACAAUU      UAC A UCAG                               C   U        -AAAAA   A |
Stem-loop sequence | UAAAAAAUCGAUGUUAACUUAUACGUUAACAUCAGUUUAUGUUAAAAACCAAUGUUAACAUAAAAAUUAACAUGUAACCGAUGUUAACGUAUAAGUUAACAUCGGUUUUUGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003555202.3 |
|
2.5 | PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100790240), mRNA | probable serine/threonine-protein kinase At1g18390(LOC100790240) | coding protein | psRNATarget |