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BaseInfo

ncRNA ID novel_gma_miR2288
Species Glycine max
Class miRNA
Genome position Chr3:37774531-37774572 [+]
Reference genome Glycine_max_v2.0
Source SRR1451654;SRR1451660
Length 20
Mature sequence(if miRNA) 1 - AUUUCUGUUAAAUUUUGCCU - 20
Stem-loop(if miRNA) --A            U   CC
   UUUCUGUUAAAU UUG  U
   |||||||||||| |||
   AAGGACGAUUUA AAC  G
AAG            C   AA
Stem-loop sequence AUUUCUGUUAAAUUUUGCCUGAACAACAUUUAGCAGGAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006596239.2
ncRNA:20   UCCGUUUUAAAUUGUCUUUA   1
  =||||||||||||*|||||*
targets:1460   GGGCAAAAUUUAAAAGAAAA   1479

2.5 PREDICTED: Glycine max uncharacterized protein At1g04910-like (LOC100784797), mRNA uncharacterized protein At1g04910-like(LOC100784797) coding protein psRNATarget
XM_003556731.2
ncRNA:20   UCCGUUUUAAAUUGUCUUUA   1
  =|||*|||||*|||||||||
targets:674   GGGCCAAAUUGAACAGAAAU   693

2.5 PREDICTED: Glycine max phosphate transporter PHO1 homolog 3-like (LOC100813818), mRNA phosphate transporter PHO1 homolog 3-like(LOC100813818) coding protein psRNATarget