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BaseInfo

ncRNA ID novel_gma_miR2281
Species Glycine max
Class miRNA
Genome position Chr20:27058503-27058606 [-]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 24
Mature sequence(if miRNA) 81 - AUCAUCGUCAUCGUCGCUACCACC - 104
Stem-loop(if miRNA) --A          CG   CU          -  --A      G  GUAA     G
   UCAUCGUCAU  UCG  ACCACCACCA CU   CUGUUA CG    UGUUG U
   ||||||||||  |||  |||||||||| ||   |||||| ||    |||||
   AGUAGUAGUA  AGU  UGGUGGUGGU GA   GACAGU GC    ACAAC A
AAA          AU   AC          A  GAC      A  ---A     G
Stem-loop sequence AUCAUCGUCAUCGUCGCUACCACCACCACUACUGUUAGCGGUAAUGUUGGUAGCAACAACGAUGACAGCAGAGAUGGUGGUGGUCAUGAUAAUGAUGAUGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779245.1
ncRNA:24   CCACCAUCGCUGCUACUGCUACUA   1
  ||||*||*||||||||||*|||||
targets:426   GGUGAUAACGACGAUGACAAUGAU   449

2.5 PREDICTED: Glycine max eggshell protein 2A-like (LOC106799773), mRNA eggshell protein 2A-like(LOC106799773) coding protein psRNATarget