ncRNA ID | novel_gma_miR2280 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:5258588-5258784 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654;SRR1451662 |
Length | 24 |
Mature sequence(if miRNA) | 174 - AAAAUUAGAGAACCAAAUUGAACC - 197 |
Stem-loop(if miRNA) |
--           CU      C       --CU  A   U      CCU      ---U     AA     C   G   U     -  GCA           CU   UUCAAUUUGGU  UCUAAU UUUAAAA    GA UCA UUUGGU   UUUGCC    AAAUU  AUUAA GGU UUA GAAAU GU   UUUUGUGGCGG  U   |||||||||||  |||||| |||||||    || ||| ||||||   ||||||    |||||  ||||| ||| ||| ||||| ||   |||||||||||  U   AAGUUAAACCA  AGAUUA AAAUUUU    CU AGU AAACCA   AGAUGG    UUUAA  UAGUU CUA AAU CUUUA CA   GAAACACCGUC  A CC           AG      -       UAAU  A   U      ---      CAGU     CC     A   G   U     A  --A           AA |
Stem-loop sequence | UUCAAUUUGGUCUUCUAAUCUUUAAAACUGAAUCAUUUUGGUCCUUUUGCCUAAAUUAAAUUAACGGUGUUAUGAAAUGUGCAUUUUGUGGCGGCUUUAAACUGCCACAAAGAACAAUUUCUUAAGAUCAUUGAUCCAAUUUUGACGGUAGAACCAAAUUGAAUCUAAUUUUUAAAAUUAGAGAACCAAAUUGAACC |