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BaseInfo

ncRNA ID	novel_gma_miR2279
Species	Glycine max
Class	miRNA
Genome position	Chr19:46344010-46344146 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451654
Length	20
Mature sequence(if miRNA)	118 - AGAAGUUUGAUUCAUUUUGC - 137
Stem-loop(if miRNA)	--AAAAC    UG       C  UUU              C        A        UAGAAGCUCU        GAGU  AACUUCU CC   AGUUAAAAUCAACU AUGCACUU AACUUUUG          C        ||||  ||||||| ||   |||||||||||||| |||||||| ||||||||          A        CUUA  UUGAAGA GG   UCAAUUUUAGUUGA UACGUGAA UUGAAAAC          U CGUUUUA    GU       A  UAU              A        G        CUAUACUAUU
Stem-loop sequence	AAAACGAGUUGAACUUCUCCCUUUAGUUAAAAUCAACUCAUGCACUUAAACUUUUGUAGAAGCUCUCAUUUAUCAUAUCCAAAAGUUGAAGUGCAUAAGUUGAUUUUAACUUAUGGAAGAAGUUUGAUUCAUUUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006582823.2	ncRNA:20   CGUUUUACUUAGUUUGAAGA   1   |*|||||||||||||||||| targets:920   GAAAAAUGAAUCAAACUUCU   939 Target Full Sequence	1.0	PREDICTED: Glycine max phosphopantothenoylcysteine decarboxylase-like (LOC100778368), transcript variant X2, mRNA	phosphopantothenoylcysteine decarboxylase-like(LOC100778368)	coding protein	psRNATarget
AK244282.1	ncRNA:20   CGUUUUACUUAGUUUGAAGA   1   *=*||||||||||||||||| targets:1848   AUUAAAUGAAUCAAACUUCU   1867 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-02-J10	NA	coding protein	psRNATarget
XM_003537852.3	ncRNA:20   CGUUUUACUUAGUUUGAAGA   1   *=*||||||||||||||||| targets:1921   AUUAAAUGAAUCAAACUUCU   1940 Target Full Sequence	2.0	PREDICTED: Glycine max cytochrome c biogenesis protein CCS1, chloroplastic (LOC100807003), transcript variant X1, mRNA	cytochrome c biogenesis protein CCS1, chloroplastic(LOC100807003)	coding protein	psRNATarget