ncRNA ID | novel_gma_miR2264 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:15552552-15552653 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654 |
Length | 21 |
Mature sequence(if miRNA) | 82 - AGCUUGUGUAGAAUGAAAUCU - 102 |
Stem-loop(if miRNA) |
--     U            ----GGG    UGGC       -C    --    G   AUUUC UUCUAUAUAAGU       CUAA    UCUCGUU  UUGA  AUUA U   ||||| ||||||||||||       ||||    |||||||  ||||  ||||   UAAAG AAGAUGUGUUCG       GAUU    AGAGCAA  AACU  UGAU A UC     U            AUAGAUA    -UUA       UA    AA    C |
Stem-loop sequence | AUUUCUUUCUAUAUAAGUGGGCUAAUGGCUCUCGUUCUUGAAUUAGUACUAGUAAUCAAAUAACGAGAAUUUUAGAUAGAUAGCUUGUGUAGAAUGAAAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006598083.2 |
|
2.5 | PREDICTED: Glycine max 11-oxo-beta-amyrin 30-oxidase-like (LOC100809929), mRNA | 11-oxo-beta-amyrin 30-oxidase-like(LOC100809929) | coding protein | psRNATarget | |||||||||
XM_006598084.2 |
|
2.5 | PREDICTED: Glycine max 11-oxo-beta-amyrin 30-oxidase-like (LOC102667924), mRNA | 11-oxo-beta-amyrin 30-oxidase-like(LOC102667924) | coding protein | psRNATarget |