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BaseInfo

ncRNA ID novel_gma_miR2264
Species Glycine max
Class miRNA
Genome position Chr17:15552552-15552653 [+]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 21
Mature sequence(if miRNA) 82 - AGCUUGUGUAGAAUGAAAUCU - 102
Stem-loop(if miRNA) --     U            ----GGG    UGGC       -C    --    G
  AUUUC UUCUAUAUAAGU       CUAA    UCUCGUU  UUGA  AUUA U
  ||||| ||||||||||||       ||||    |||||||  ||||  ||||
  UAAAG AAGAUGUGUUCG       GAUU    AGAGCAA  AACU  UGAU A
UC     U            AUAGAUA    -UUA       UA    AA    C
Stem-loop sequence AUUUCUUUCUAUAUAAGUGGGCUAAUGGCUCUCGUUCUUGAAUUAGUACUAGUAAUCAAAUAACGAGAAUUUUAGAUAGAUAGCUUGUGUAGAAUGAAAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598083.2
ncRNA:21   UCUAAAGUAAGAUGUGUUCGA   1
  **||*|||||=||||||||||
targets:1544   UCAUAUCAUUUUACACAAGCU   1564

2.5 PREDICTED: Glycine max 11-oxo-beta-amyrin 30-oxidase-like (LOC100809929), mRNA 11-oxo-beta-amyrin 30-oxidase-like(LOC100809929) coding protein psRNATarget
XM_006598084.2
ncRNA:21   UCUAAAGUAAGAUGUGUUCGA   1
  **||*|||||=||||||||||
targets:1703   UCAUAUCAUUUUACACAAGCU   1723

2.5 PREDICTED: Glycine max 11-oxo-beta-amyrin 30-oxidase-like (LOC102667924), mRNA 11-oxo-beta-amyrin 30-oxidase-like(LOC102667924) coding protein psRNATarget