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BaseInfo

ncRNA ID	novel_gma_miR2263
Species	Glycine max
Class	miRNA
Genome position	Chr17:4591783-4591936 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451654
Length	21
Mature sequence(if miRNA)	1 - UUUUGUUUUCUUCUUCUACUG - 21
Stem-loop(if miRNA)	--UA     U             C         UG         ------  C  U     UAAACAAUAA     AUCU     AGAGG AGAAAGUAGAGUG AGCCAAGGA  ACUUGCCGG      AG AA AAGAA          AAUGU    A     ||||| ||||||||||||| |||||||||  |||||||||      || || |||||          |||||    U     UCUUC UCUUUUGUUUUAC UCGGUUCUU  UGAACGGCC      UC UU UUCUU          UUACA    U GUCA     U             A         GU         GCACUU  -  C     CUUCUUCUUC     AUAU
Stem-loop sequence	UAAGAGGUAGAAAGUAGAGUGCAGCCAAGGAUGACUUGCCGGAGCAAUAAGAAUAAACAAUAAAAUGUAUCUAUUUAUAACAUUCUUCUUCUUCUUCUUCUUCUUUCACGCCGGCAAGUUGUUCUUGGCUACAUUUUGUUUUCUUCUUCUACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003521799.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *|*|||||||||||||||||| targets:996   AACUAGAAGAAGAAAACAAAA   1016 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100804676 (LOC100804676), mRNA	uncharacterized LOC100804676(LOC100804676)	coding protein	psRNATarget
XM_003517070.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   =|||||||||||||||*|||| targets:159   UAGUAGAAGAAGAAAAAAAAA   179 Target Full Sequence	1.5	PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 4 (LOC100787496), mRNA	plant intracellular Ras-group-related LRR protein 4(LOC100787496)	coding protein	psRNATarget
XM_014765944.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *|||||||||||||||*|||| targets:517   AAGUAGAAGAAGAAAAGAAAA   537 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102670225 (LOC102670225), mRNA	uncharacterized LOC102670225(LOC102670225)	coding protein	psRNATarget
XM_003536323.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   ==||||||||||||||*|||| targets:905   UGGUAGAAGAAGAAAAAAAAA   925 Target Full Sequence	1.5	PREDICTED: Glycine max receptor-like cytosolic serine/threonine-protein kinase RBK2 (LOC100780587), transcript variant X1, mRNA	receptor-like cytosolic serine/threonine-protein kinase RBK2(LOC100780587)	coding protein	psRNATarget
XM_006606581.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *=||||||||*|||||||||| targets:860   AGGUAGAAGACGAAAACAAAA   880 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100780121 (LOC100780121), mRNA	uncharacterized LOC100780121(LOC100780121)	coding protein	psRNATarget
XM_003541962.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*||||||||||||||||* targets:448   AAGAAGAAGAAGAAAACAAAU   468 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100778156 (LOC100778156), mRNA	uncharacterized LOC100778156(LOC100778156)	coding protein	psRNATarget
XM_003546990.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*||||||||||||||||* targets:438   AAGAAGAAGAAGAAAACAAAU   458 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100794154 (LOC100794154), mRNA	uncharacterized LOC100794154(LOC100794154)	coding protein	psRNATarget
XM_003528980.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   =|||||||||||||=|||||= targets:188   UAGUAGAAGAAGAAGACAAAG   208 Target Full Sequence	2.5	PREDICTED: Glycine max ELMO domain-containing protein C-like (LOC100801211), transcript variant X1, mRNA	ELMO domain-containing protein C-like(LOC100801211)	coding protein	psRNATarget
XM_006580422.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *|||||=||=||||||||||| targets:1754   GAGUAGGAGGAGAAAACAAAA   1774 Target Full Sequence	2.5	PREDICTED: Glycine max NAC domain-containing protein 73-like (LOC100794811), mRNA	NAC domain-containing protein 73-like(LOC100794811)	coding protein	psRNATarget
XM_003538760.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   |*||=||||||||||||||=| targets:1307   CUGUGGAAGAAGAAAACAAGA   1327 Target Full Sequence	2.5	PREDICTED: Glycine max filament-like plant protein 7 (LOC100808759), transcript variant X1, mRNA	filament-like plant protein 7(LOC100808759)	coding protein	psRNATarget
XM_006590588.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   |*||=||||||||||||||=| targets:1302   CUGUGGAAGAAGAAAACAAGA   1322 Target Full Sequence	2.5	PREDICTED: Glycine max filament-like plant protein 7 (LOC100808759), transcript variant X2, mRNA	filament-like plant protein 7(LOC100808759)	coding protein	psRNATarget
XM_014770988.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   =||*||||||||||||=|||| targets:151   UAGAAGAAGAAGAAAAUAAAA   171 Target Full Sequence	2.5	PREDICTED: Glycine max nicastrin-like (LOC100818367), mRNA	nicastrin-like(LOC100818367)	coding protein	psRNATarget
BT091837.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   =|||||*||||||||||=||| targets:56   UAGUAGCAGAAGAAAACGAAA   76 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-8N20 unknown mRNA	NA	coding protein	psRNATarget
NM_001250608.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   =|||||*||||||||||=||| targets:56   UAGUAGCAGAAGAAAACGAAA   76 Target Full Sequence	2.5	Glycine max uncharacterized LOC100527028 (LOC100527028), mRNA	uncharacterized LOC100527028(LOC100527028)	coding protein	psRNATarget
XM_014776168.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   **||=||||||||||||||=| targets:1284   GUGUGGAAGAAGAAAACAAGA   1304 Target Full Sequence	2.5	PREDICTED: Glycine max filament-like plant protein 7 (LOC100800905), transcript variant X1, mRNA	filament-like plant protein 7(LOC100800905)	coding protein	psRNATarget
XM_003517262.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   **||=||||||||||||||=| targets:1272   GUGUGGAAGAAGAAAACAAGA   1292 Target Full Sequence	2.5	PREDICTED: Glycine max filament-like plant protein 7 (LOC100800905), transcript variant X2, mRNA	filament-like plant protein 7(LOC100800905)	coding protein	psRNATarget
XM_003541325.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*|||||||||||=||||| targets:3423   AAGGAGAAGAAGAAAGCAAAA   3443 Target Full Sequence	2.5	PREDICTED: Glycine max ABC transporter C family member 5-like (LOC100781010), mRNA	ABC transporter C family member 5-like(LOC100781010)	coding protein	psRNATarget
XM_003521268.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*|||||||||||=||||| targets:3324   GAGAAGAAGAAGAAAGCAAAA   3344 Target Full Sequence	2.5	PREDICTED: Glycine max ABC transporter C family member 5-like (LOC100790550), transcript variant X1, mRNA	ABC transporter C family member 5-like(LOC100790550)	coding protein	psRNATarget
XM_014773839.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*|||||||||||=||||| targets:3175   GAGAAGAAGAAGAAAGCAAAA   3195 Target Full Sequence	2.5	PREDICTED: Glycine max ABC transporter C family member 5-like (LOC100790550), transcript variant X2, mRNA	ABC transporter C family member 5-like(LOC100790550)	coding protein	psRNATarget
BT098469.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *||*||||||||||=|||||| targets:1269   AAGAAGAAGAAGAAGACAAAA   1289 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26N3 unknown mRNA	NA	coding protein	psRNATarget
XM_003547591.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *|*|||||||=|||||||||| targets:974   AACUAGAAGAGGAAAACAAAA   994 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100816878 (LOC100816878), mRNA	uncharacterized LOC100816878(LOC100816878)	coding protein	psRNATarget
XM_006603771.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   ==|||*||||||=|||||||| targets:1257   UGGUACAAGAAGGAAACAAAA   1277 Target Full Sequence	2.5	PREDICTED: Glycine max senescence-associated carboxylesterase 101-like (LOC100797620), transcript variant X1, mRNA	senescence-associated carboxylesterase 101-like(LOC100797620)	coding protein	psRNATarget
XM_006603772.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   ==|||*||||||=|||||||| targets:1255   UGGUACAAGAAGGAAACAAAA   1275 Target Full Sequence	2.5	PREDICTED: Glycine max senescence-associated carboxylesterase 101-like (LOC100797620), transcript variant X2, mRNA	senescence-associated carboxylesterase 101-like(LOC100797620)	coding protein	psRNATarget
XM_006586026.2	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *=|*|||||||||||||=||| targets:360   GGGAAGAAGAAGAAAACGAAA   380 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100799455 (LOC100799455), transcript variant X1, mRNA	uncharacterized LOC100799455(LOC100799455)	coding protein	psRNATarget
XM_014779408.1	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *=|*|||||||||||||=||| targets:362   GGGAAGAAGAAGAAAACGAAA   382 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100799455 (LOC100799455), transcript variant X2, mRNA	uncharacterized LOC100799455(LOC100799455)	coding protein	psRNATarget
XM_003555450.3	ncRNA:21   GUCAUCUUCUUCUUUUGUUUU   1   *=|*|||||||||||||=||| targets:1149   GGGAAGAAGAAGAAAACGAAA   1169 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100812185 (LOC100812185), mRNA	uncharacterized LOC100812185(LOC100812185)	coding protein	psRNATarget