ncRNA ID | novel_gma_miR2255 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:18580681-18580772 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654 |
Length | 19 |
Mature sequence(if miRNA) | 74 - AAAAUCGAUGUUGUAAAGU - 92 |
Stem-loop(if miRNA) |
---AUU             ---G    A     --AAAAGU  UA   U       UAACAUCGGUUUU    AACA AGGUU        AU  AUG U       |||||||||||||    |||| |||||        ||  |||       GUUGUAGCUAAAA    UUGU UUCAA        UG  UAC A UGAAAU             AAAA    A     AAAAAUAU  GC   A |
Stem-loop sequence | AUUUAACAUCGGUUUUGAACAAAGGUUAAAAGUAUUAAUGUUAACAUCGGUUAUAAAAAAACUUAUGUUAAAAAAAAUCGAUGUUGUAAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006589622.2 |
|
2.5 | PREDICTED: Glycine max putative membrane-bound O-acyltransferase C24H6.01c (LOC100781294), transcript variant X2, mRNA | putative membrane-bound O-acyltransferase C24H6.01c(LOC100781294) | coding protein | psRNATarget | |||||||||
XM_003535676.3 |
|
2.5 | PREDICTED: Glycine max putative membrane-bound O-acyltransferase C24H6.01c (LOC100781294), transcript variant X1, mRNA | putative membrane-bound O-acyltransferase C24H6.01c(LOC100781294) | coding protein | psRNATarget |