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BaseInfo

ncRNA ID novel_gma_miR2254
Species Glycine max
Class miRNA
Genome position Chr15:34434897-34434978 [+]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 24
Mature sequence(if miRNA) 59 - UUACAUCAACACCGUCUUUGAAAG - 82
Stem-loop(if miRNA) --            AC   C     C   -A  UUUGAAAG
  UUCAAAGACGGU  UGA GUAAG ACU  UC        U
  ||||||||||||  ||| ||||| |||  ||        U
  AAGUUUCUGCCA  ACU CAUUC UGG  CA        G
GA            CA   A     A   CA  AUCUUGUG
Stem-loop sequence UUCAAAGACGGUACUGACGUAAGCACUAUCUUUGAAAGUUGGUGUUCUAACACGGUACUUACAUCAACACCGUCUUUGAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516754.2
ncRNA:24   GAAAGUUUCUGCCACAACUACAUU   1
  ****||||||=||||||||||||*
targets:734   AGAGCAAAGAUGGUGUUGAUGUAU   757

2.0 PREDICTED: Glycine max carotenoid cleavage dioxygenase 7, chloroplastic (LOC100795056), mRNA carotenoid cleavage dioxygenase 7, chloroplastic(LOC100795056) coding protein psRNATarget