ncRNA ID | novel_gma_miR2247 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:22223879-22223980 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451654;SRR1294485;SRR1451670;SRR1451672;SRR1451676;SRR1451679;SRR1451681;SRR1753104;SRR1451612 |
Length | 22 |
Mature sequence(if miRNA) | 81 - CGACGAUGAUGAUAAAUGUGAU - 102 |
Stem-loop(if miRNA) |
--   C     --       U   AUUC  UU   AU   A    UC   AUU   CGA GAUGA  UGAUAAA GUG    AC  AUU  GAG UCCU  GCC   U   ||| |||||  ||||||| |||    ||  |||  ||| ||||  |||   GUU UUAUU  AUUGUUU CAC    UG  UAA  CUC AGGA  UGG   G AU   -     UC       U   -AUA  UC   CC   A    CC   AAA |
Stem-loop sequence | CGACGAUGAUGAUAAAUGUGAUUCACUUAUUAUGAGAUCCUUCGCCAUUUGAAAGGUCCAGGAACUCCCAAUCUGUAUACACUUUUGUUACUUUAUUUUGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550868.3 |
|
2.0 | PREDICTED: Glycine max transcription factor bHLH148-like (LOC100803765), mRNA | transcription factor bHLH148-like(LOC100803765) | coding protein | psRNATarget |