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BaseInfo

ncRNA ID novel_gma_miR2247
Species Glycine max
Class miRNA
Genome position Chr13:22223879-22223980 [-]
Reference genome Glycine_max_v2.0
Source SRR1451654;SRR1294485;SRR1451670;SRR1451672;SRR1451676;SRR1451679;SRR1451681;SRR1753104;SRR1451612
Length 22
Mature sequence(if miRNA) 81 - CGACGAUGAUGAUAAAUGUGAU - 102
Stem-loop(if miRNA) --   C     --       U   AUUC  UU   AU   A    UC   AUU
  CGA GAUGA  UGAUAAA GUG    AC  AUU  GAG UCCU  GCC   U
  ||| |||||  ||||||| |||    ||  |||  ||| ||||  |||
  GUU UUAUU  AUUGUUU CAC    UG  UAA  CUC AGGA  UGG   G
AU   -     UC       U   -AUA  UC   CC   A    CC   AAA
Stem-loop sequence CGACGAUGAUGAUAAAUGUGAUUCACUUAUUAUGAGAUCCUUCGCCAUUUGAAAGGUCCAGGAACUCCCAAUCUGUAUACACUUUUGUUACUUUAUUUUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550868.3
ncRNA:22   UAGUGUAAAUAGUAGUAGCAGC   1
  =||||*||*|||||||||||||
targets:220   GUCACCUUCAUCAUCAUCGUCG   241

2.0 PREDICTED: Glycine max transcription factor bHLH148-like (LOC100803765), mRNA transcription factor bHLH148-like(LOC100803765) coding protein psRNATarget