ncRNA ID | novel_gma_miR2243 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:36747097-36747275 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294483 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AGGGACAAGAGAGAAGUUAGAUCU - 179 |
Stem-loop(if miRNA) |
--             G      -      --A           ------    A     A  -   --CUCC     AA   -U     UAU   A   AUUUGACUUCUCU UUGUCU UUUUUC   UGUUGUUCUUG      UCCU UAAAA UA ACA      AUGAU  UUA  AUUAA   UUA U   ||||||||||||| |||||| ||||||   |||||||||||      |||| ||||| || |||      |||||  |||  |||||   |||   UAGAUUGAAGAGA AACAGG AGAAAG   AUAACAAGAAC      AGGA AUUUU AU UGU      UACUA  AAU  UAAUU   AAU A UC             G      G      AAG           ACAACA    A     A  A   UAAAAU     AA   UC     UAC   A |
Stem-loop sequence | AUUUGACUUCUCUGUUGUCUUUUUUCAUGUUGUUCUUGUCCUAUAAAAAUAACACUCCAUGAUAAUUAUAUUAAUAUUUAAUAAUAACAUUUAAUCUUAAAAAUCAUUAAAAUUGUAUAAUUUUAAAGGAACAACACAAGAACAAUAGAAGAAAGAGGGACAAGAGAGAAGUUAGAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775739.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100786676 (LOC100786676), mRNA | uncharacterized LOC100786676(LOC100786676) | coding protein | psRNATarget |