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BaseInfo

ncRNA ID novel_gma_miR2243
Species Glycine max
Class miRNA
Genome position Chr16:36747097-36747275 [+]
Reference genome Glycine_max_v2.0
Source SRR1294483
Length 24
Mature sequence(if miRNA) 156 - AGGGACAAGAGAGAAGUUAGAUCU - 179
Stem-loop(if miRNA) --             G      -      --A           ------    A     A  -   --CUCC     AA   -U     UAU   A
  AUUUGACUUCUCU UUGUCU UUUUUC   UGUUGUUCUUG      UCCU UAAAA UA ACA      AUGAU  UUA  AUUAA   UUA U
  ||||||||||||| |||||| ||||||   |||||||||||      |||| ||||| || |||      |||||  |||  |||||   |||
  UAGAUUGAAGAGA AACAGG AGAAAG   AUAACAAGAAC      AGGA AUUUU AU UGU      UACUA  AAU  UAAUU   AAU A
UC             G      G      AAG           ACAACA    A     A  A   UAAAAU     AA   UC     UAC   A
Stem-loop sequence AUUUGACUUCUCUGUUGUCUUUUUUCAUGUUGUUCUUGUCCUAUAAAAAUAACACUCCAUGAUAAUUAUAUUAAUAUUUAAUAAUAACAUUUAAUCUUAAAAAUCAUUAAAAUUGUAUAAUUUUAAAGGAACAACACAAGAACAAUAGAAGAAAGAGGGACAAGAGAGAAGUUAGAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775739.1
ncRNA:24   UCUAGAUUGAAGAGAGAACAGGGA   1
  ***|||*|=||||||||||||||*
targets:640   CCCUCUCAUUUCUCUCUUGUCCCC   663

3.0 PREDICTED: Glycine max uncharacterized LOC100786676 (LOC100786676), mRNA uncharacterized LOC100786676(LOC100786676) coding protein psRNATarget