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BaseInfo

ncRNA ID	novel_gma_miR2238
Species	Glycine max
Class	miRNA
Genome position	Chr12:1928502-1928594 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451654;SRR1451605;SRR1451609;SRR1451611;SRR1451620
Length	22
Mature sequence(if miRNA)	1 - UUGAGAAUUAAAAUGUAAACUU - 22
Stem-loop(if miRNA)	--A                ------  A -      ---------        A    UUUACAUUUUAAUUCU      GU C CGUUAA         AAUUCUUU A    ||||||||||||||||      || | ||||||         |||||||| C    AAAUGUAAAAUUAAGA      CA G GCAAUU         UUAAGGAA U UUC                GUUUUC  G A      AAAAAAAAA        A
Stem-loop sequence	AUUUACAUUUUAAUUCUGUACCGUUAAAAUUCUUUAACUAAAGGAAUUAAAAAAAAAUUAACGAGGACCUUUUGAGAAUUAAAAUGUAAACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006577048.2	ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1   *|||||||||||||||||||** targets:1935   UAGUUUACAUUUUAAUUCUCUU   1956 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1   *|||||||||||||||||||** targets:2045   UAGUUUACAUUUUAAUUCUCUU   2066 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014775780.1	ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1   |**||||=|||||*|||||||| targets:2385   AUUUUUAUAUUUUUAUUCUCAA   2406 Target Full Sequence	2.5	PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X3, mRNA	ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815)	coding protein	psRNATarget
XM_014775779.1	ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1   |**||||=|||||*|||||||| targets:2456   AUUUUUAUAUUUUUAUUCUCAA   2477 Target Full Sequence	2.5	PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X2, mRNA	ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815)	coding protein	psRNATarget
XM_003524240.3	ncRNA:22   UUCAAAUGUAAAAUUAAGAGUU   1   |**||||=|||||*|||||||| targets:2513   AUUUUUAUAUUUUUAUUCUCAA   2534 Target Full Sequence	2.5	PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 27-like (LOC100813815), transcript variant X1, mRNA	ubiquitin carboxyl-terminal hydrolase 27-like(LOC100813815)	coding protein	psRNATarget