Search result

BaseInfo

ncRNA ID novel_gma_miR2236
Species Glycine max
Class miRNA
Genome position Chr12:12993634-12993685 [-]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 22
Mature sequence(if miRNA) 31 - UUGACCGAGACUAUUUGACUGU - 52
Stem-loop(if miRNA) --   AC            A  -  U
  UUG  CGAGACUAUUUG CU GU U
  |||  |||||||||||| || || G
  GAC  GUUUUGAUGAAC GA CA U
AG   CA            A  A  U
Stem-loop sequence UUGACCGAGACUAUUUGACUGUUUGUUACAAGACAAGUAGUUUUGACCAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775525.1
ncRNA:22   UGUCAGUUUAUCAGAGCCAGUU   1
  ||||||||||||||*|||||||
targets:1639   ACAGUCAAAUAGUCCCGGUCAA   1660

1.5 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget
XM_014775524.1
ncRNA:22   UGUCAGUUUAUCAGAGCCAGUU   1
  ||||||||||||||*|||||||
targets:1059   ACAGUCAAAUAGUCCCGGUCAA   1080

1.5 PREDICTED: Glycine max myb-related protein 315-like (LOC100777804), mRNA myb-related protein 315-like(LOC100777804) coding protein psRNATarget