Search result

BaseInfo

ncRNA ID	novel_gma_miR2231
Species	Glycine max
Class	miRNA
Genome position	Chr11:33089632-33089848 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451654
Length	23
Mature sequence(if miRNA)	1 - UUAUGAAUCUGCAAAUACUUGGC - 23
Stem-loop(if miRNA)	--                                              UA         UUG     ---A    A  AUUUGCAGAUUCACAGCAUGACGUGGCCUCUCA   CAAGUAUUUGCAGAUUCAUAAGUUGAGGAUAGCAGAAUAUGGAACU  UAUUUUAAG   AGGAA    GCUA GU                                 U   ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||   |||||    |||| ||                                 U   GUUCAUAAACGUCUAAGUAUUCAACUCCUAUCGUCUUAUACCUUGA  AUAGAAUUU   UCCUU    UGAC AU                                 U CG                                              --         UUG     AAAU    -  UUAUUAUGUCGUAGUGUUCUCAAAUAAAACACA
Stem-loop sequence	CAAGUAUUUGCAGAUUCAUAAGUUGAGGAUAGCAGAAUAUGGAACUUAUAUUUUAAGUUGAGGAAAGCUAAGUAUUUGCAGAUUCACAGCAUGACGUGGCCUCUCAUUUACACAAAAUAAACUCUUGUGAUGCUGUAUUAUUUACAGUUAAAUUCCUGUUUUUAAGAUAAGUUCCAUAUUCUGCUAUCCUCAACUUAUGAAUCUGCAAAUACUUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779358.1	ncRNA:23   CGGUUCAUAAACGUCUAAGUAUU   1   *==|||*=*|||||||||||||| targets:2048   UUUAAGAGGUUGCAGAUUCAUAA   2070 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC100810811), transcript variant X2, mRNA	TMV resistance protein N-like(LOC100810811)	coding protein	psRNATarget
XM_006585964.2	ncRNA:23   CGGUUCAUAAACGUCUAAGUAUU   1   *==|||*=*|||||||||||||| targets:2050   UUUAAGAGGUUGCAGAUUCAUAA   2072 Target Full Sequence	3.0	PREDICTED: Glycine max TMV resistance protein N-like (LOC100810811), transcript variant X1, mRNA	TMV resistance protein N-like(LOC100810811)	coding protein	psRNATarget