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BaseInfo

ncRNA ID novel_gma_miR2228
Species Glycine max
Class miRNA
Genome position Chr11:32236903-32237011 [+]
Reference genome Glycine_max_v2.0
Source SRR1451654
Length 24
Mature sequence(if miRNA) 86 - CUUCCGCUGUUGUUACUUUCAACU - 109
Stem-loop(if miRNA) --      A                 GG          G U  -  - C     A
  UUGAAA UAACAACAGCGGAAGAA  UUCUUUCGUG A UC CU G GGAAG A
  |||||| |||||||||||||||||  |||||||||| | || || | ||||| C
  AACUUU AUUGUUGUCGCCUUCUU  AAGAAGGCAC U AG GA C CCUUC U
UC      C                 GG          G U  A  G A     U
Stem-loop sequence UUGAAAAUAACAACAGCGGAAGAAGGUUCUUUCGUGGAUUCCUGCGGAAGAACUUCUUCCACGAGAGAUUGCACGGAAGAAGGUUCUUCCGCUGUUGUUACUUUCAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006590109.1
ncRNA:24   UCAACUUUCAUUGUUGUCGCCUUC   1
  ||**|||=|||||||||||*||||
targets:813   AGAAGAAGGUAACAACAGCAGAAG   836

2.5 PREDICTED: Glycine max putative UPF0481 protein At3g02645 (LOC102667685), mRNA putative UPF0481 protein At3g02645(LOC102667685) coding protein psRNATarget