Search result

BaseInfo

ncRNA ID novel_gma_miR2225
Species Glycine max
Class miRNA
Genome position Chr14:13751546-13751636 [+]
Reference genome Glycine_max_v2.0
Source SRR1294483;SRR1753104;SRR2045233;SRR2045234;SRR2045235;SRR1295528;SRR1295529;SRR1451612;SRR1451618
Length 22
Mature sequence(if miRNA) 1 - UUGAAUGAAGAAUCCCUUGGCA - 22
Stem-loop(if miRNA) --                           CCGAA  GG UU   U
  UUGAAUGAAGAAUCCCUUGGCAAAUUC     GG  A  UGG C
  |||||||||||||||||||||||||||     ||  |  ||| A
  AACUUACUUCUUAGGGAACUGUUUAAG     CC  U  ACU A
AA                           UAAUA  UU UU   C
Stem-loop sequence UUGAAUGAAGAAUCCCUUGGCAAAUUCCCGAAGGGGAUUUGGUCAACUCAUUUUUCCAUAAUGAAUUUGUCAAGGGAUUCUUCAUUCAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548213.3
ncRNA:22   ACGGUUCCCUAAGAAGUAAGUU   1
  ||*|||||*=||||||||||||
targets:686   UGGCAAGGUGUUCUUCAUUCAA   707

2.5 PREDICTED: Glycine max peroxidase 47-like (LOC100796105), mRNA peroxidase 47-like(LOC100796105) coding protein psRNATarget