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BaseInfo

ncRNA ID novel_gma_miR2223
Species Glycine max
Class miRNA
Genome position Chr2:13527885-13527934 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 22
Mature sequence(if miRNA) 29 - UCAACCAAUGAACUUUAUGCCU - 50
Stem-loop(if miRNA) -UC         A U    G    G
   AACCAAUGA C UUAU CCUA G
   ||||||||| | |||| ||||
   UUGGUUAUU G AAUG GGAU G
CUA         A C    -    A
Stem-loop sequence UCAACCAAUGAACUUUAUGCCUAGGGAUAGGGUAACGAUUAUUGGUUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006605826.2
ncRNA:22   UCCGUAUUUCAAGUAACCAACU   1
  *||*|||||||||||||||||=
targets:814   UGGAAUAAAGUUCAUUGGUUGG   835

2.0 PREDICTED: Glycine max glycine-rich RNA-binding protein RZ1C-like (LOC100809519), transcript variant X2, mRNA glycine-rich RNA-binding protein RZ1C-like(LOC100809519) coding protein psRNATarget
XM_003542809.3
ncRNA:22   UCCGUAUUUCAAGUAACCAACU   1
  |***|||||*||||||||||||
targets:1060   AAAAAUAAACUUCAUUGGUUGA   1081

2.5 PREDICTED: Glycine max uncharacterized LOC100794315 (LOC100794315), mRNA uncharacterized LOC100794315(LOC100794315) coding protein psRNATarget
XM_006589640.2
ncRNA:22   UCCGUAUUUCAAGUAACCAACU   1
  *||*|||=|||||||||||||=
targets:811   UGGAAUAGAGUUCAUUGGUUGG   832

3.0 PREDICTED: Glycine max glycine-rich RNA-binding protein RZ1C (LOC100776333), transcript variant X2, mRNA glycine-rich RNA-binding protein RZ1C(LOC100776333) coding protein psRNATarget
XM_014763424.1
ncRNA:22   UCCGUAUUUCAAGUAACCAACU   1
  *||*|||=|||||||||||||=
targets:925   UGGAAUAGAGUUCAUUGGUUGG   946

3.0 PREDICTED: Glycine max glycine-rich RNA-binding protein RZ1C (LOC100776333), transcript variant X1, mRNA glycine-rich RNA-binding protein RZ1C(LOC100776333) coding protein psRNATarget