ncRNA ID | novel_gma_miR2211 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:39384908-39384992 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAAUGUUUGGACCAAUAGAUU - 22 |
Stem-loop(if miRNA) |
--            -CCA      U      -U       UGG   CAAAUGUUUGGA    AUAGAU UUAUUU  AAGACUU   C   ||||||||||||    |||||| ||||||  |||||||   A   GUUUACAGAUCU    UAUUUA AGUAAG  UUCUGAA   U AA            UAUG      U      UU       UUU |
Stem-loop sequence | CAAAUGUUUGGACCAAUAGAUUUUAUUUUAAGACUUUGGCAUUUUAAGUCUUUUGAAUGAUAUUUAUGUAUUCUAGACAUUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006580094.2 |
|
2.5 | PREDICTED: Glycine max protochlorophyllide-dependent translocon component 52, chloroplastic (LOC100784940), mRNA | protochlorophyllide-dependent translocon component 52, chloroplastic(LOC100784940) | coding protein | psRNATarget | |||||||||
AK287007.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-42-A08 | NA | coding protein | psRNATarget |