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BaseInfo

ncRNA ID novel_gma_miR2204
Species Glycine max
Class miRNA
Genome position Chr18:3987242-3987329 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 24
Mature sequence(if miRNA) 65 - UUAAGUUGUCUGCAUUUGGGGACC - 88
Stem-loop(if miRNA) --A         G             --  -   --    AGGAGA
   UCCCAAAUG AGACAACUUAAGC  AG CAC  ACCU      A
   ||||||||| |||||||||||||  || |||  ||||      A
   GGGGUUUAC UCUGUUGAAUUCG  UC GUG  UGGA      A
CCA         G             AA  A   AU    GGAAAC
Stem-loop sequence AUCCCAAAUGGAGACAACUUAAGCAGCACACCUAGGAGAAAACAAAGGAGGUUAGUGACUAAGCUUAAGUUGUCUGCAUUUGGGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768257.1
ncRNA:24   CCAGGGGUUUACGUCUGUUGAAUU   1
  |*|==|||||*|||*|||||||||
targets:855   GCUUUCCAAACGCAAACAACUUAA   878

2.5 PREDICTED: Glycine max DUF21 domain-containing protein At2g14520-like (LOC100799797), transcript variant X2, mRNA DUF21 domain-containing protein At2g14520-like(LOC100799797) coding protein psRNATarget
XM_003545719.3
ncRNA:24   CCAGGGGUUUACGUCUGUUGAAUU   1
  |*|==|||||*|||*|||||||||
targets:1606   GCUUUCCAAACGCAAACAACUUAA   1629

2.5 PREDICTED: Glycine max DUF21 domain-containing protein At2g14520-like (LOC100799797), transcript variant X1, mRNA DUF21 domain-containing protein At2g14520-like(LOC100799797) coding protein psRNATarget