ncRNA ID | novel_gma_miR2204 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:3987242-3987329 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 24 |
Mature sequence(if miRNA) | 65 - UUAAGUUGUCUGCAUUUGGGGACC - 88 |
Stem-loop(if miRNA) |
--A         G             --  -   --    AGGAGA    UCCCAAAUG AGACAACUUAAGC  AG CAC  ACCU      A    ||||||||| |||||||||||||  || |||  ||||      A    GGGGUUUAC UCUGUUGAAUUCG  UC GUG  UGGA      A CCA         G             AA  A   AU    GGAAAC |
Stem-loop sequence | AUCCCAAAUGGAGACAACUUAAGCAGCACACCUAGGAGAAAACAAAGGAGGUUAGUGACUAAGCUUAAGUUGUCUGCAUUUGGGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768257.1 |
|
2.5 | PREDICTED: Glycine max DUF21 domain-containing protein At2g14520-like (LOC100799797), transcript variant X2, mRNA | DUF21 domain-containing protein At2g14520-like(LOC100799797) | coding protein | psRNATarget | |||||||||
XM_003545719.3 |
|
2.5 | PREDICTED: Glycine max DUF21 domain-containing protein At2g14520-like (LOC100799797), transcript variant X1, mRNA | DUF21 domain-containing protein At2g14520-like(LOC100799797) | coding protein | psRNATarget |