| ncRNA ID | novel_gma_miR2187 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr13:3072504-3072725 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1294482 |
| Length | 22 |
| Mature sequence(if miRNA) | 201 - UUAAAACGCUCGAAAUUGAAAG - 222 |
| Stem-loop(if miRNA) |
-- C A A C U C AUUUAACA CC - UUUUAAUCU UUAAAACGCUCGAAAUUGAAAGAGGAAUUCC UGGCAAAUUCCCAAAGG GAUUUGG CAACUCAUUUUU CAA AAA GC UCUAA ACC CAAA U ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||| ||| || ||||| ||| |||| AGUUUUGCGAGCUUUAACUUUCUCCUUAAGG ACCGUUUAAGGGUUUCC CUAAACC GUUGAGUAAAAA GUU UUU CG AGAUU UGG GUUU A AC A C A A U A -------G CA A UUAUCCUAA |
| Stem-loop sequence | UUAAAACGCUCGAAAUUGAAAGAGGAAUUCCCUGGCAAAUUCCCAAAGGAGAUUUGGACAACUCAUUUUUCCAAUAAACGCAUUUAACAUCUAACCACCCAAAUUUUAAUCUUAAAUCCUAUUUUUGAGGUACUUAGAGGCAUUUUUUGAAAAAAUGAGUUGACCAAAUCCCCUUUGGGAAUUUGCCAAGGAAUUCCUCUUUCAAUUUCGAGCGUUUUGACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003547498.3 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
| XM_014768353.1 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |