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BaseInfo

ncRNA ID novel_gma_miR2182
Species Glycine max
Class miRNA
Genome position Chr16:19142948-19143104 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 24
Mature sequence(if miRNA) 1 - UUAAAAAAACCGAUGUUAACUGUC - 24
Stem-loop(if miRNA) --UU                  ------------------U  CAAUAGUAACACAUUCGUUAACAUCGAUUUUUUUACAGAAAACC
    AAAAAAACCGAUGUUAAC                   GU                                            G
    ||||||||||||||||||                   ||                                            A
    UUUUUUUGGCUACAAUUG                   CA                                            U
AAAU                  CUUACACAAUGACAACUGU  AUUGUAGCUAAAAAAUGUCUUUUGACUACAAUUGCAAGCAAUUG
Stem-loop sequence UUAAAAAAACCGAUGUUAACUGUCAAUAGUAACACAUUCGUUAACAUCGAUUUUUUUACAGAAAACCGAUGUUAACGAACGUUAACAUCAGUUUUCUGUAAAAAAUCGAUGUUAACUGUCAACAGUAACACAUUCGUUAACAUCGGUUUUUUUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:15   GACAUUUAACAUCGGUUUUUUAAA   38

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:56   GACAUUUAACAUCGGUUUUUUAAA   79

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  ||||*||||||||||||||||*||
targets:157   GACAUUUAACAUCGGUUUUUUAAA   180

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   CUGUCAAUUGUAGCCAAAAAAAUU   1
  *|||*||||||||||||||||*||
targets:116   AACAUUUAACAUCGGUUUUUUAAA   139

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget