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BaseInfo

ncRNA ID novel_gma_miR2161
Species Glycine max
Class miRNA
Genome position Chr12:11805546-11805595 [+]
Reference genome Glycine_max_v2.0
Source SRR1294482
Length 22
Mature sequence(if miRNA) 1 - UGACCGGAACUAUUUGACUAUU - 22
Stem-loop(if miRNA) UGA    AACUAUUU           A
   CCGG        GACUAUUUGUU C
   ||||        |||||||||||
   GGCC        UUGAUGAACAG A
--A    ----AGUU           A
Stem-loop sequence UGACCGGAACUAUUUGACUAUUUGUUACAAGACAAGUAGUUUUGACCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775525.1
ncRNA:22   UUAUCAGUUUAUCAAGGCCAGU   1
  ||*|||||||||||*|||||||
targets:1638   AACAGUCAAAUAGUCCCGGUCA   1659

1.5 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget
XM_014775524.1
ncRNA:22   UUAUCAGUUUAUCAAGGCCAGU   1
  ||*|||||||||||*|||||||
targets:1058   AACAGUCAAAUAGUCCCGGUCA   1079

1.5 PREDICTED: Glycine max myb-related protein 315-like (LOC100777804), mRNA myb-related protein 315-like(LOC100777804) coding protein psRNATarget