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BaseInfo

ncRNA ID	novel_gma_miR2154
Species	Glycine max
Class	miRNA
Genome position	Chr12:23305095-23305223 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451653;SRR1451654;SRR1451658;SRR1451660;SRR1451663;SRR1451611
Length	22
Mature sequence(if miRNA)	1 - CUUUCUAAGACGGUUGUUUGCU - 22
Stem-loop(if miRNA)	--                                            A    U         CCA   CUUUCUAAGACGGUUGUUUGCUAACAACUGUCUUAGAAAGUAUC UUUC AAGAUGGUC   G   |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||   A   GAAAGAUUCUGCCAACGAAUGAUUGUUGGCAGAAUCUUUUAUGG AAAG UUUUACCAG   U GU                                            G    U         CAA
Stem-loop sequence	CUUUCUAAGACGGUUGUUUGCUAACAACUGUCUUAGAAAGUAUCAUUUCUAAGAUGGUCCCAGAUAACGACCAUUUUUGAAAGGGUAUUUUCUAAGACGGUUGUUAGUAAGCAACCGUCUUAGAAAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764114.1	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   ||-|=||||||||||||||||| targets:2087   AG-AGACAACCGUCUUAGAAAG   2107 Target Full Sequence	1.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X6, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764113.1	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   ||-|=||||||||||||||||| targets:2095   AG-AGACAACCGUCUUAGAAAG   2115 Target Full Sequence	1.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X2, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_006591004.2	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   ||-|=||||||||||||||||| targets:2151   AG-AGACAACCGUCUUAGAAAG   2171 Target Full Sequence	1.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X5, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764112.1	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   ||-|=||||||||||||||||| targets:2167   AG-AGACAACCGUCUUAGAAAG   2187 Target Full Sequence	1.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X1, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014775518.1	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   |*==||=||||||||||||||| targets:737   AUUGAAUAACCGUCUUAGAAAG   758 Target Full Sequence	2.0	PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA	methylsterol monooxygenase 1-1-like(LOC100802435)	coding protein	psRNATarget
XM_014767461.1	ncRNA:22   UCGUUUGUUGGCAGAAUCUUUC   1   =*==|*|||||||||||||||| targets:1934   GUUGACCAACCGUCUUAGAAAG   1955 Target Full Sequence	2.0	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget