ncRNA ID | novel_gma_miR2152 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:2543891-2543974 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAGGUAAAACUCCAAUUCU - 21 |
Stem-loop(if miRNA) |
--       A   A    UU        CA    UCUUU    C   AAUUGGA UUU ACUU  GUAAUCUG  UAAU     AAUG A   ||||||| ||| ||||  ||||||||  ||||     ||||   UUAACCU AAA UGGA  UAUUAGAC  AUUA     UUAC A UC       C   A    CC        AC    ----U    A |
Stem-loop sequence | AAUUGGAAUUUAACUUUUGUAAUCUGCAUAAUUCUUUAAUGCAAACAUUUAUUACACAGAUUAUCCAGGUAAAACUCCAAUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003541738.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100818960 (LOC100818960), mRNA | uncharacterized LOC100818960(LOC100818960) | coding protein | psRNATarget | |||||||||
XM_006583153.2 |
|
2.5 | PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X2, mRNA | protein yippee-like At4g27745(LOC100788878) | coding protein | psRNATarget | |||||||||
XM_006583151.2 |
|
2.5 | PREDICTED: Glycine max protein yippee-like At4g27745 (LOC100788878), transcript variant X1, mRNA | protein yippee-like At4g27745(LOC100788878) | coding protein | psRNATarget |