ncRNA ID | novel_gma_miR2142 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:28560122-28560309 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUAGAGAACCGUCUUAGAAUGUC - 24 |
Stem-loop(if miRNA) |
GAA          - -   UGGGAAAACAUAAAAAAUAGACUUUCUAAGACGUUUCUUUCCAGAUAAUCAUCUUAGAAUUUCUUUUUUAAAAAA    UCUAAGACGG U UUU                                                                           A    |||||||||| | |||    UAAGAUUCUG C AGA                                                                           U CUG          C A   GAUUUUUAGACAGAAUUUUAAUCUGAAAGAUUCUGCCAAAAACUCUUUUGACAGAAUAUUAGGCGUUAUAAAAUU |
Stem-loop sequence | GAAUCUAAGACGGUUUUUGGGAAAACAUAAAAAAUAGACUUUCUAAGACGUUUCUUUCCAGAUAAUCAUCUUAGAAUUUCUUUUUUAAAAAAAUUUAAAAUAUUGCGGAUUAUAAGACAGUUUUCUCAAAAACCGUCUUAGAAAGUCUAAUUUUAAGACAGAUUUUUAGAGAACCGUCUUAGAAUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |