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BaseInfo

ncRNA ID novel_gma_miR2142
Species Glycine max
Class miRNA
Genome position Chr10:28560122-28560309 [-]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 24
Mature sequence(if miRNA) 1 - UUUAGAGAACCGUCUUAGAAUGUC - 24
Stem-loop(if miRNA) GAA          - -   UGGGAAAACAUAAAAAAUAGACUUUCUAAGACGUUUCUUUCCAGAUAAUCAUCUUAGAAUUUCUUUUUUAAAAAA
   UCUAAGACGG U UUU                                                                           A
   |||||||||| | |||
   UAAGAUUCUG C AGA                                                                           U
CUG          C A   GAUUUUUAGACAGAAUUUUAAUCUGAAAGAUUCUGCCAAAAACUCUUUUGACAGAAUAUUAGGCGUUAUAAAAUU
Stem-loop sequence GAAUCUAAGACGGUUUUUGGGAAAACAUAAAAAAUAGACUUUCUAAGACGUUUCUUUCCAGAUAAUCAUCUUAGAAUUUCUUUUUUAAAAAAAUUUAAAAUAUUGCGGAUUAUAAGACAGUUUUCUCAAAAACCGUCUUAGAAAGUCUAAUUUUAAGACAGAUUUUUAGAGAACCGUCUUAGAAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CUGUAAGAUUCUGCCAAGAGAUUU   1
  *||||||||||||||||||||=||
targets:2608   UACAUUCUAAGACGGUUCUCUGAA   2631

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget