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BaseInfo

ncRNA ID	novel_gma_miR2140
Species	Glycine max
Class	miRNA
Genome position	Chr9:30131975-30132060 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294482
Length	21
Mature sequence(if miRNA)	1 - CAAUCAGAACAUGACACGUGG - 21
Stem-loop(if miRNA)	--              A    GAU    ACUCC    C        U   ACGUGUCAUGUUCU AUUG   GUCA     AUGG AGAUGACA G   |||||||||||||| ||||   ||||     |||| |||||||| C   UGCACAGUACAAGA UAAC   UAGU     UACU UCUGCUGU A GG              C    ---    -----    -        U
Stem-loop sequence	ACGUGUCAUGUUCUAAUUGGAUGUCAACUCCAUGGCAGAUGACAUGCAUUGUCGUCUUCAUUGAUCAAUCAGAACAUGACACGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003518407.3	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||*|||||||||| targets:1639   UCACGUGUCACGUUCUGAUUG   1659 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA	UPF0481 protein At3g47200-like(LOC100803577)	coding protein	psRNATarget
LQ242574.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:20   UCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2985353	NA	coding protein	psRNATarget
HI410444.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:20   UCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2074227	NA	coding protein	psRNATarget
JB170905.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:20   UCACGUGUCAUGUUCUAAUUA   40 Target Full Sequence	2.5	Sequence 8569 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:81   UCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget
HI410445.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:81   UCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
JB170906.1	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   =|||||||||||||||*|||* targets:81   UCACGUGUCAUGUUCUAAUUA   101 Target Full Sequence	2.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
XM_003547146.3	ncRNA:21   GGUGCACAGUACAAGACUAAC   1   *=|||||*|||||||||||*| targets:2391   AUACGUGCCAUGUUCUGAUGG   2411 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09900-like (LOC100802835), mRNA	pentatricopeptide repeat-containing protein At1g09900-like(LOC100802835)	coding protein	psRNATarget