| ncRNA ID | novel_gma_miR2139 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr1:33481733-33481927 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1451653;SRR1451609;SRR1451611;SRR1451615 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - UUGAAUAACCGUCUUAGAAUGU - 22 |
| Stem-loop(if miRNA) |
--C A A A AG C C AAUUCUCUAAAUAACU UAGAAUUUAUUUAUUUUUUAAAUUAAAAAA UUUUAAGAUG UUAUUCAAA AACC UCUUAGAAAGU A UUU UAAGAC GUCU C |||||||||| ||||||||| |||| ||||||||||| | ||| |||||| |||| A AAGAUUCUGC AAUAAGUUU UUGG AGAAUCUUUCA U AAA AUUCUG AAAA A UGU C C C GA A A --------------CC UGUCUUUUUAUCAGAAUCUUAGAAAAAAAA |
| Stem-loop sequence | CUUUUAAGAUGAUUAUUCAAAAAACCAUCUUAGAAAGUAGACUUUCUAAGACAAUUCUCUAAAUAACUGUCUUAGAAUUUAUUUAUUUUUUAAAUUAAAAAACAAAAAAAAAAGAUUCUAAGACUAUUUUUCUGUAAAACCGUCUUAAAAAAUAGACUUUCUAAGACGGUUCUUUGAAUAACCGUCUUAGAAUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006599236.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA | uncharacterized LOC100788736(LOC100788736) | coding protein | psRNATarget | |||||||||
| XM_003534913.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100781107 (LOC100781107), mRNA | uncharacterized LOC100781107(LOC100781107) | coding protein | psRNATarget |