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BaseInfo

ncRNA ID	novel_gma_miR2138
Species	Glycine max
Class	miRNA
Genome position	Chr1:33724710-33724916 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451653
Length	22
Mature sequence(if miRNA)	1 - CUAAUAACCGUCUUUGAAUGUU - 22
Stem-loop(if miRNA)	--                   CCG  A               -GUAU  C   UUG                     CU    A     A        A G  UC   CAUUCAAAGACGGUUAUUA   AA AACCGUCUUUGAAUG     GU UGC   GACAUUCAAAGACGGUUAUUA  UAAU ACCGU UUUGAAUG U CG  U   |||||||||||||||||||   || |||||||||||||||     || |||   |||||||||||||||||||||  |||| ||||| |||||||| | ||   GUAAGUUUCUGCCAAUAAU   UU UUGGCAGAAACUUAC     CA AUG   UUGUAAGUUUCUGUCAAUAAU  AUUA UGGCA AAACUUAC A GU  G UU                   CUA  A               AGUUU  U   -UG                     AC    C     G        - G  UC
Stem-loop sequence	CAUUCAAAGACGGUUAUUACCGAAAAACCGUCUUUGAAUGGUAUGUCUGCUUGGACAUUCAAAGACGGUUAUUACUUAAUAACCGUAUUUGAAUGAUGCGUCUGCUUGGACAUUCAAAGACGGUCAUUACAUAAUAACUGUCUUUGAAUGUUGUGUAUACUUUGACAUUCAAAGACGGUUAUUAUCUAAUAACCGUCUUUGAAUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775607.1	ncRNA:22   UUGUAAGUUUCUGCCAAUAAUC   1   |||||||||||||||||||||* targets:1487   AACAUUCAAAGACGGUUAUUAA   1508 Target Full Sequence	1.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:22   UUGUAAGUUUCUGCCAAUAAUC   1   |||||||||||||||||||||* targets:1542   AACAUUCAAAGACGGUUAUUAA   1563 Target Full Sequence	1.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:22   UUGUAAGUUUCUGCCAAUAAUC   1   |=|||||||||=|||||||||| targets:1652   AGCAUUCAAAGGCGGUUAUUAG   1673 Target Full Sequence	1.5	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:22   UUGUAAGUUUCUGCCAAUAAUC   1   |||||||||||=|||||||||* targets:1597   AACAUUCAAAGGCGGUUAUUAA   1618 Target Full Sequence	2.5	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014773514.1	ncRNA:22   UUGUAAGUUUCUGCCAAUAAUC   1   *||||||*||||||||||||*| targets:267   CACAUUCUAAGACGGUUAUUUG   288 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA	uncharacterized LOC106798042(LOC106798042)	coding protein	psRNATarget