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BaseInfo

ncRNA ID novel_gma_miR2137
Species Glycine max
Class miRNA
Genome position Chr11:30310138-30310205 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 24
Mature sequence(if miRNA) 1 - AAGAUGGUUAUUAUAGAACUGCCU - 24
Stem-loop(if miRNA) --AA       A        CU       UA   U
    GAUGGUU UUAUAGAA  GCCUUUG  AUG U
    ||||||| ||||||||  |||||||  |||
    CUGCCAA AAUAUUUU  UGGAAAC  UAC C
AUUG       A        AG       --   A
Stem-loop sequence AAGAUGGUUAUUAUAGAACUGCCUUUGUAAUGUUCACAUCAAAGGUGAUUUUAUAAAAACCGUCGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006592249.2
ncRNA:24   UC-CGUCAAGAUAUUAUUGGUAGAA   1
  ||-|*||||=||||||||=||||||
targets:1643   AGAGAAGUUUUAUAAUAAUCAUCUU   1667

2.5 PREDICTED: Glycine max DNA polymerase epsilon catalytic subunit A-like (LOC100812003), transcript variant X2, mRNA DNA polymerase epsilon catalytic subunit A-like(LOC100812003) coding protein psRNATarget
XM_006592248.2
ncRNA:24   UC-CGUCAAGAUAUUAUUGGUAGAA   1
  ||-|*||||=||||||||=||||||
targets:1646   AGAGAAGUUUUAUAAUAAUCAUCUU   1670

2.5 PREDICTED: Glycine max DNA polymerase epsilon catalytic subunit A-like (LOC100812003), transcript variant X1, mRNA DNA polymerase epsilon catalytic subunit A-like(LOC100812003) coding protein psRNATarget
XM_014773077.1
ncRNA:24   UCCGUCAAGAUAUUAUUGGUAGAA   1
  *|*=||||=|||||*|||||||||
targets:12   UGAUAGUUUUAUAAAAACCAUCUU   35

2.5 PREDICTED: Glycine max uncharacterized protein C26H5.07c-like (LOC102666872), mRNA uncharacterized protein C26H5.07c-like(LOC102666872) coding protein psRNATarget