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BaseInfo

ncRNA ID novel_gma_miR2129
Species Glycine max
Class miRNA
Genome position Chr9:10868991-10869126 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 24
Mature sequence(if miRNA) 113 - AACCGAUGUUAACUCUAUGAACUU - 136
Stem-loop(if miRNA) --CUGA   U                 UAA  AU         CAUCAAAUACAUU          UU
      AUA AGUUAACAUUGGUUUUG   AA  CGAUGUUAA             ACAUCGGUUU  U
      ||| |||||||||||||||||   ||  |||||||||             ||||||||||
      UAU UCAAUUGUAGCCAAAAC   UU  GCUACAAUU             UGUAGCCAAA  A
UUCAAG   C                 UCC  CG         CCUCAACUAAAAU          CA
Stem-loop sequence CUGAAUAUAGUUAACAUUGGUUUUGUAAAAAUCGAUGUUAACAUCAAAUACAUUACAUCGGUUUUUUAACAAACCGAUGUUAAAAUCAACUCCUUAACAUCGGCUUCCUCAAAACCGAUGUUAACUCUAUGAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588840.2
ncRNA:24   UUCAAGUAUCUCAAUUGUAGCCAA   1
  ||*|||||**||||||||||||||
targets:9   AACUUCAUUCAGUUAACAUCGGUU   32

2.0 PREDICTED: Glycine max actin-related protein 7-like (LOC100803056), transcript variant X1, mRNA actin-related protein 7-like(LOC100803056) coding protein psRNATarget