ncRNA ID | novel_gma_miR2127 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:17251584-17251683 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 21 |
Mature sequence(if miRNA) | 80 - CAAAUAACCGUCUUAGAAAGU - 100 |
Stem-loop(if miRNA) |
--                     CUUUUAUUGU          A          A   CAAAUAACCGUCUUAGAAAGU          GUAUAUUCUA GACGGUUAUU A   |||||||||||||||||||||          |||||||||| ||||||||||   GUUUAUUGGCAGAAUCUUUCA          CAUGUAAGAU CUGUCAGUAA G AA                     ----------          C          A |
Stem-loop sequence | CAAAUAACCGUCUUAGAAAGUCUUUUAUUGUGUAUAUUCUAAGACGGUUAUUAAGAAAUGACUGUCCUAGAAUGUACACUUUCUAAGACGGUUAUUUGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773514.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget | |||||||||
XM_014771087.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |