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BaseInfo

ncRNA ID novel_gma_miR2123
Species Glycine max
Class miRNA
Genome position Chr8:39610116-39610162 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 22
Mature sequence(if miRNA) 26 - UUUUCUAAGACGGUUUUUUAAG - 47
Stem-loop(if miRNA) --CU                UUG
    GAAAACCGUCUUAGGA   U
    ||||||||||||||||   A
    UUUUUGGCAGAAUCUU   A
GAAU                UUC
Stem-loop sequence CUGAAAACCGUCUUAGGAUUGUAACUUUUCUAAGACGGUUUUUUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544705.3
ncRNA:22   GAAUUUUUUGGCAGAAUCUUUU   1
  =|||||||||||||||*|||||
targets:2   UUUAAAAAACCGUCUUUGAAAA   23

1.5 PREDICTED: Glycine max 60S ribosomal protein L10-like (LOC100809571), mRNA 60S ribosomal protein L10-like(LOC100809571) coding protein psRNATarget
XM_014775518.1
ncRNA:22   GAAUUUUUUGGCAGAAUCUUUU   1
  *||=||*||||||||||||||=
targets:737   AUUGAAUAACCGUCUUAGAAAG   758

3.0 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget
XM_006599236.2
ncRNA:22   GAAUUUUUUGGCAGAAUCUUUU   1
  |||**|=|||||||||||||||
targets:399   CUUUUAGAACCGUCUUAGAAAA   420

3.0 PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA uncharacterized LOC100788736(LOC100788736) coding protein psRNATarget