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BaseInfo

ncRNA ID novel_gma_miR2122
Species Glycine max
Class miRNA
Genome position Chr8:38093480-38093553 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 21
Mature sequence(if miRNA) 54 - UUUUAAAAAACCGAUGUAACC - 74
Stem-loop(if miRNA) -UUA           -G      C A         AG
    ACAUCGGUUUU  AGAAAA C AUGUUAAGG  U
    |||||||||||  |||||| | |||||||||
    UGUAGCCAAAA  UUUUUU G UACAAUUCU  U
CCAA           AA      A C         AU
Stem-loop sequence UUAACAUCGGUUUUGAGAAAACCAAUGUUAAGGAGUUUAUCUUAACAUCGAUUUUUUAAAAAACCGAUGUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:18   AUUUAACAUCGGUUUUUUAAAA   39

2.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-||||||||||||||||
targets:119   AUUUAACAUCGGUUUUUUAAAA   140

2.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
BT093149.1
ncRNA:21   CCAAUGUAGCCAAAAAAUUUU   1
  **|||*||||||||||||*||
targets:486   UCUUAAAUCGGUUUUUUAUAA   506

2.5 Soybean clone JCVI-FLGm-22N9 unknown mRNA NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:59   AUUUAACAUCGGUUUUUUAAAU   80

3.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:21   CCAAU-GUAGCCAAAAAAUUUU   1
  **|||-|||||||||||||||*
targets:160   AUUUAACAUCGGUUUUUUAAAU   181

3.0 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget