Search result

BaseInfo

ncRNA ID	novel_gma_miR2121
Species	Glycine max
Class	miRNA
Genome position	Chr8:8896448-8896539 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451653
Length	24
Mature sequence(if miRNA)	1 - CAAAUUAGCUAAUGGAGAGCUCAU - 24
Stem-loop(if miRNA)	--                    C     A CU    C  ---A   U   GAGCUCUCCAUUAGCUAAUU GUAGA G  CUCU AU    UAG U   |||||||||||||||||||| ||||| |  |||| ||    ||| U   CUCGAGAGGUAAUCGAUUAA CAUCU C  GAGA UA    AUC C UA                    A     A AG    U  GAAA   U
Stem-loop sequence	GAGCUCUCCAUUAGCUAAUUCGUAGAAGCUCUCUCAUAUAGUUUCUCUAAAAGAUUAGAGGACAUCUACAAAUUAGCUAAUGGAGAGCUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003525187.3	ncRNA:24   UACUCGAGAGGUAAUCGAUUAAAC   1   |||||=|||=|||||||||||||| targets:1846   AUGAGUUCUUCAUUAGCUAAUUUG   1869 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget
XM_006594197.2	ncRNA:24   UACUCGAGAGGUAAUCGAUUAAAC   1   ||*||=|=|||||||||||||||* targets:793   AUAAGUUUUCCAUUAGCUAAUUUA   816 Target Full Sequence	3.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget
XM_003541440.3	ncRNA:24   UACUCGAGAGGUAAUCGAUUAAAC   1   ||*||=|=|||||||||||||||* targets:793   AUAAGUUUUCCAUUAGCUAAUUUA   816 Target Full Sequence	3.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget