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BaseInfo

ncRNA ID novel_gma_miR2119
Species Glycine max
Class miRNA
Genome position Chr7:40200765-40200856 [+]
Reference genome Glycine_max_v2.0
Source SRR1451653
Length 21
Mature sequence(if miRNA) 72 - UAGUUCCAGAAUUUAAAUUUC - 92
Stem-loop(if miRNA) --            U        ---U       U          AU
  AAUUUAAAUUCU GAAUUAUG    AAAAAAA GAUUUUCAAA  U
  |||||||||||| ||||||||    ||||||| ||||||||||  U
  UUAAAUUUAAGA CUUGAUAC    UUUUUUU UUGAAGGUUU  A
CU            C        UUUC       U          CA
Stem-loop sequence AAUUUAAAUUCUUGAAUUAUGUAAAAAAAUGAUUUUCAAAAUUUAACUUUGGAAGUUUUUUUUUUCUUUCAUAGUUCCAGAAUUUAAAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600586.2
ncRNA:21   CUUUAAAUUUAAGACCUUGAU   1
  |||=*||*|||||||||||||
targets:630   GAAGCUUUAAUUCUGGAACUA   650

3.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase SIS3-like (LOC100785373), transcript variant X2, mRNA E3 ubiquitin-protein ligase SIS3-like(LOC100785373) coding protein psRNATarget
XM_003549577.3
ncRNA:21   CUUUAAAUUUAAGACCUUGAU   1
  |||=*||*|||||||||||||
targets:1042   GAAGCUUUAAUUCUGGAACUA   1062

3.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase SIS3-like (LOC100785373), transcript variant X1, mRNA E3 ubiquitin-protein ligase SIS3-like(LOC100785373) coding protein psRNATarget