ncRNA ID | novel_gma_miR2119 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:40200765-40200856 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451653 |
Length | 21 |
Mature sequence(if miRNA) | 72 - UAGUUCCAGAAUUUAAAUUUC - 92 |
Stem-loop(if miRNA) |
--            U        ---U       U          AU   AAUUUAAAUUCU GAAUUAUG    AAAAAAA GAUUUUCAAA  U   |||||||||||| ||||||||    ||||||| ||||||||||  U   UUAAAUUUAAGA CUUGAUAC    UUUUUUU UUGAAGGUUU  A CU            C        UUUC       U          CA |
Stem-loop sequence | AAUUUAAAUUCUUGAAUUAUGUAAAAAAAUGAUUUUCAAAAUUUAACUUUGGAAGUUUUUUUUUUCUUUCAUAGUUCCAGAAUUUAAAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600586.2 |
|
3.0 | PREDICTED: Glycine max E3 ubiquitin-protein ligase SIS3-like (LOC100785373), transcript variant X2, mRNA | E3 ubiquitin-protein ligase SIS3-like(LOC100785373) | coding protein | psRNATarget | |||||||||
XM_003549577.3 |
|
3.0 | PREDICTED: Glycine max E3 ubiquitin-protein ligase SIS3-like (LOC100785373), transcript variant X1, mRNA | E3 ubiquitin-protein ligase SIS3-like(LOC100785373) | coding protein | psRNATarget |